Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D12
         (334 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   0.84 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   2.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   2.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   2.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   2.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   7.8  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 223 FCGVDFSSSSNFGHSQFRTSL 161
           +  +D+ SSS   HSQF   L
Sbjct: 259 YSNMDYLSSSTMSHSQFGNGL 279


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -1

Query: 331 HIRASIVLALINRGEYVMTRRGAFSMNDNV*HLSVIFCGVDF 206
           H+ AS  + +   G   MT  G+F   D     +++F  +++
Sbjct: 107 HVNASFDVVVYIHGGAFMTGYGSFYQPDYFIDKNIVFVNLNY 148


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -1

Query: 331 HIRASIVLALINRGEYVMTRRGAFSMNDNV*HLSVIFCGVDF 206
           H+ AS  + +   G   MT  G+F   D     +++F  +++
Sbjct: 107 HVNASFDVVVYIHGGAFMTGYGSFYQPDYFIDKNIVFVNLNY 148


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -1

Query: 331 HIRASIVLALINRGEYVMTRRGAFSMNDNV*HLSVIFCGVDF 206
           H+ AS  + +   G   MT  G+F   D     +++F  +++
Sbjct: 107 HVNASFDVVVYIHGGAFMTGYGSFYQPDYFIDKNIVFVNLNY 148


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -1

Query: 331 HIRASIVLALINRGEYVMTRRGAFSMNDNV*HLSVIFCGVDF 206
           H+ AS  + +   G   MT  G+F   D     +++F  +++
Sbjct: 107 HVNASFDVVVYIHGGAFMTGYGSFYQPDYFIDKNIVFVNLNY 148


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 23  ILSNIQFDHTKKCWSSVMMFDQSR 94
           +L   Q    K C S VMMF  +R
Sbjct: 382 LLREDQIALLKACSSEVMMFRMAR 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,074
Number of Sequences: 336
Number of extensions: 1551
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)