Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D12
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32684-1|CAA83632.2|  444|Homo sapiens membrane transport protei...    29   4.5  
DQ062746-1|AAY43132.1|  444|Homo sapiens Kell blood group precur...    29   4.5  
BC036019-1|AAH36019.1|  444|Homo sapiens X-linked Kx blood group...    29   4.5  
AY534238-1|AAT07087.1|  444|Homo sapiens XK-related protein 1 pr...    29   4.5  

>Z32684-1|CAA83632.2|  444|Homo sapiens membrane transport protein
           protein.
          Length = 444

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = +3

Query: 81  LTSHVVNLHPGFSCT*IHCYCTYSGNGNDVRNCECPKLELELKSTPQKMTLKCQTLSFIE 260
           L  H++ L P F C     +C Y  +GN+    E P + +  K    K  L  +    + 
Sbjct: 70  LLLHLLQLGPLFRC--FEVFCIYFQSGNN----EEPYVSITKKRQMPKNGLSEEIEKEVG 123

Query: 261 KAPLRVITYSPRFIRARTIDA 323
           +A  ++IT+   F RA  I A
Sbjct: 124 QAEGKLITHRSAFSRASVIQA 144


>DQ062746-1|AAY43132.1|  444|Homo sapiens Kell blood group precursor
           (McLeod phenotype) protein.
          Length = 444

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = +3

Query: 81  LTSHVVNLHPGFSCT*IHCYCTYSGNGNDVRNCECPKLELELKSTPQKMTLKCQTLSFIE 260
           L  H++ L P F C     +C Y  +GN+    E P + +  K    K  L  +    + 
Sbjct: 70  LLLHLLQLGPLFRC--FEVFCIYFQSGNN----EEPYVSITKKRQMPKNGLSEEIEKEVG 123

Query: 261 KAPLRVITYSPRFIRARTIDA 323
           +A  ++IT+   F RA  I A
Sbjct: 124 QAEGKLITHRSAFSRASVIQA 144


>BC036019-1|AAH36019.1|  444|Homo sapiens X-linked Kx blood group
           (McLeod syndrome) protein.
          Length = 444

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = +3

Query: 81  LTSHVVNLHPGFSCT*IHCYCTYSGNGNDVRNCECPKLELELKSTPQKMTLKCQTLSFIE 260
           L  H++ L P F C     +C Y  +GN+    E P + +  K    K  L  +    + 
Sbjct: 70  LLLHLLQLGPLFRC--FEVFCIYFQSGNN----EEPYVSITKKRQMPKNGLSEEIEKEVG 123

Query: 261 KAPLRVITYSPRFIRARTIDA 323
           +A  ++IT+   F RA  I A
Sbjct: 124 QAEGKLITHRSAFSRASVIQA 144


>AY534238-1|AAT07087.1|  444|Homo sapiens XK-related protein 1
           protein.
          Length = 444

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = +3

Query: 81  LTSHVVNLHPGFSCT*IHCYCTYSGNGNDVRNCECPKLELELKSTPQKMTLKCQTLSFIE 260
           L  H++ L P F C     +C Y  +GN+    E P + +  K    K  L  +    + 
Sbjct: 70  LLLHLLQLGPLFRC--FEVFCIYFQSGNN----EEPYVSITKKRQMPKNGLSEEIEKEVG 123

Query: 261 KAPLRVITYSPRFIRARTIDA 323
           +A  ++IT+   F RA  I A
Sbjct: 124 QAEGKLITHRSAFSRASVIQA 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,496,672
Number of Sequences: 237096
Number of extensions: 835221
Number of successful extensions: 1571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)