Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D12
         (334 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger ho...    28   3.4  
AE014296-3133|AAO41226.1|  358|Drosophila melanogaster CG9614-PI...    28   3.4  
AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA p...    28   3.4  

>M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger
            homeodomain protein 2 protein.
          Length = 3005

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 150  SGNGNDVRNCECPKLELELKSTPQKMTLKCQTLSF 254
            SG+  D   C CP  + +L+    K  L CQ  +F
Sbjct: 1047 SGSAEDDPQCACPDEDQQLQLQSSKKLLLCQLCNF 1081


>AE014296-3133|AAO41226.1|  358|Drosophila melanogaster CG9614-PI,
           isoform I protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 189 SGTRNSVHHCRFLNMYSNSEFRYKRT 112
           SG RN++HH RF N    SE  +K++
Sbjct: 226 SGYRNAIHHRRFPNATIKSEKWFKKS 251


>AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA
            protein.
          Length = 3005

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 150  SGNGNDVRNCECPKLELELKSTPQKMTLKCQTLSF 254
            SG+  D   C CP  + +L+    K  L CQ  +F
Sbjct: 1047 SGSAEDDPQCACPDEDQQLQLQSSKKLLLCQLCNF 1081


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,227,404
Number of Sequences: 53049
Number of extensions: 266618
Number of successful extensions: 643
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)