Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_D10
(529 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 2.9
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 22 3.8
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 3.8
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 3.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 5.1
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 6.7
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 6.7
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 6.7
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 6.7
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.9
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 2.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 61 PDSLCNGRSRP 29
PD CNG +RP
Sbjct: 549 PDQFCNGDNRP 559
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.8 bits (44), Expect = 3.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 77 QTRPPPRLPVQWKV*ARSFSP 15
Q R PPR P+Q K+ A P
Sbjct: 56 QFRGPPRTPLQPKLVAGKLKP 76
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +1
Query: 187 NYLISARAKVWTQLVLHKLFYGYMLDKNVLEVIA 288
N L++ W + + L+Y Y +D+++ + ++
Sbjct: 334 NALLALLDDYWNEYIPPILYYNYTVDRDLQDEVS 367
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +1
Query: 187 NYLISARAKVWTQLVLHKLFYGYMLDKNVLEVIA 288
N L++ W + + L+Y Y +D+++ + ++
Sbjct: 334 NALLALLDDYWNEYIPPILYYNYTVDRDLQDEVS 367
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 5.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 61 PDSLCNGRSRPA 26
P CNG +RPA
Sbjct: 549 PQQFCNGDNRPA 560
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.0 bits (42), Expect = 6.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 51 RESGRWPGLAGLTFSAGRGRVGTWDGRMTG 140
+ESG GL T S VG W+ G
Sbjct: 132 QESGDIAGLRNKTHSQPMQGVGNWERHTKG 161
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +1
Query: 187 NYLISARAKVWTQLVLHKLFYGYMLDKNVLEVIA 288
N L++ W + + L+Y Y +D+++ + ++
Sbjct: 334 NQLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVS 367
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +1
Query: 187 NYLISARAKVWTQLVLHKLFYGYMLDKNVLEVIA 288
N L++ W + + L+Y Y +D+++ + ++
Sbjct: 334 NQLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVS 367
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +1
Query: 187 NYLISARAKVWTQLVLHKLFYGYMLDKNVLEVIA 288
N L++ W + + L+Y Y +D+++ + ++
Sbjct: 334 NQLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVS 367
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 525 NLMTSLSTIANKLPQYACILLITLTYFEVGQYLI 424
+L L+ +A LPQ + + + TYF +++
Sbjct: 252 SLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMV 285
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 525 NLMTSLSTIANKLPQYACILLITLTYFEVGQYLI 424
+L L+ +A LPQ + + + TYF +++
Sbjct: 252 SLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMV 285
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 525 NLMTSLSTIANKLPQYACILLITLTYFEVGQYLI 424
+L L+ +A LPQ + + + TYF +++
Sbjct: 252 SLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMV 285
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,272
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -