Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D07
         (477 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032640-1|CAA21640.1|   62|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF016653-1|AAC48224.1|   85|Caenorhabditis elegans Hypothetical ...    27   7.0  

>AL032640-1|CAA21640.1|   62|Caenorhabditis elegans Hypothetical
           protein Y43F8A.1 protein.
          Length = 62

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 399 PGVTSAIYQKKSRQNPFRRLP 461
           PG  SAIYQ+KS   PF   P
Sbjct: 34  PGGRSAIYQRKSYLQPFYNAP 54


>AF016653-1|AAC48224.1|   85|Caenorhabditis elegans Hypothetical
           protein C41D7.1 protein.
          Length = 85

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 379 FSKIIRVPSKKNNTHKNENKIRIY-GHVL*INETYLYFILDTN 254
           F KI ++P+ +N   KN+N   I+  H   I    + +I  TN
Sbjct: 12  FHKISKIPNFQNTRRKNKNNFSIFHAHRFWIFSNNVPYIFSTN 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,535,231
Number of Sequences: 27780
Number of extensions: 180308
Number of successful extensions: 405
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)