Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D07
         (477 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   2.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   3.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   5.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.8  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   6.8  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 405 VTSAIYQKKSRQN 443
           VTSAI+Q+KS +N
Sbjct: 18  VTSAIHQRKSSKN 30



 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 355 SKKNNTHKNENKIRIYGHV 299
           +K NN + N+NK +   H+
Sbjct: 418 AKSNNQNNNQNKYKNQAHL 436


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 232 NQRSAEYMQHRHSRVH 185
           NQ +  Y  H+H R H
Sbjct: 117 NQNNNHYTSHQHLRTH 132


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 199 HSRVHPASAYNYKLYS*NHYN-FYCDINDLISHINTWFYINKIFV 68
           ++  H  +A+       N  N F+CD++ L+S +     +NK+ V
Sbjct: 34  NTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRLNKLAV 78


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 373 KIIRVPSKKNNTHKNENKIRIYGHVL*INETYLYF 269
           ++I +P K+     NE  I I      + ET++ F
Sbjct: 360 RVISIPDKEITVPSNEETIDINNGAELMQETHVCF 394


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 133 YCDINDLISHINTW 92
           YC  N L++HI T+
Sbjct: 45  YCSRNSLMTHIYTY 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,050
Number of Sequences: 438
Number of extensions: 2418
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)