Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D02
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.33 
X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           23   2.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   2.3  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.4  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 207 CTSAGAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVC 335
           C   G  F P+   +     + + I  +GN++A  DG V  VC
Sbjct: 770 CEERGILFMPIPNRY----REAKQIYKVGNVQAYIDGNVVFVC 808


>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 144 KGLSKGKHGFHVHEFGDNTNGCT 212
           KGL KG    H    GDN  G T
Sbjct: 9   KGLGKGGAKRHRKVLGDNIQGIT 31


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 389 SASNNAVGSN*RDLRVLNANLSNTTITGSF 300
           SA N + GSN +       N SNTT   SF
Sbjct: 605 SAENLSSGSNNQTSSASRENTSNTTSMESF 634


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 114 FHPFGRRKLFHSHLREERIQL*QACRRRYVTIYVSI 7
           + P   + +  S  RE+ I +   C +  V IYV +
Sbjct: 80  YQPISYKWITRSGTREQFIDMVARCNKAGVRIYVDV 115


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 405 PHGLPKCVQQCCWVQLTRSESP 340
           PH +PK +Q+   ++ T   SP
Sbjct: 451 PHAVPKYIQRLKAIRATLKASP 472


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 405 PHGLPKCVQQCCWVQLTRSESP 340
           PH +PK +Q+   ++ T   SP
Sbjct: 366 PHAVPKYIQRLKAIRATLKASP 387


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 405 PHGLPKCVQQCCWVQLTRSESP 340
           PH +PK +Q+   ++ T   SP
Sbjct: 685 PHAVPKYIQRLKAIRATLKASP 706


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 235 GLK*APAEVQPLVLSPN 185
           GL+ A A VQP V+S N
Sbjct: 572 GLRVADASVQPQVISGN 588


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 321 HHHHWKLQY 295
           HH HW L Y
Sbjct: 208 HHWHWHLVY 216


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 261 DSDTRHIGDLGNIEASSD 314
           DSD   IGDL  I A  D
Sbjct: 42  DSDGDGIGDLNGITARMD 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,183
Number of Sequences: 438
Number of extensions: 3155
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)