Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D01
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   2.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   3.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   4.5  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   7.9  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +1

Query: 283 GTYCENRVPNPLITSR----IGYSDPCSLRPCRNGGTCRADLNSR 405
           GT  +NR+   ++       I  S  C+L+ C N G   AD+  +
Sbjct: 140 GTTLQNRLDEAILIKNERICILKSITCALQFCHNAGIVHADVKPK 184


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 425 QSQVWLILEFKSALHVPPLRQGRREHGSL 339
           Q  V+ +L F++     P+R GRR+  S+
Sbjct: 66  QPSVYPLLRFENPETHHPIRHGRRQSRSM 94



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 416 VWLILEFKSALHVPPLRQ 363
           VW+I++   A+H  P R+
Sbjct: 785 VWMIIDPAKAMHHYPTRE 802


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 391 QLYMYHRYDKAVENMDRYN 335
           +LY   R    VEN+D YN
Sbjct: 54  ELYQKARTFNLVENLDNYN 72


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 391 QLYMYHRYDKAVENMDRYN 335
           +LY   R    VEN+D YN
Sbjct: 54  ELYQKARTFNLVENLDNYN 72


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 68  PVLLFNTIESSTPPTNMGVSNL 3
           P L  +T   S PP N GVS +
Sbjct: 368 PKLNLSTALMSQPPPNFGVSQV 389


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 400 NLSQLYMYHRYDKAVENMDRYNRF 329
           +LS  Y Y  Y+    N + YN +
Sbjct: 317 SLSNNYKYSNYNNYNNNYNNYNNY 340


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 400 NLSQLYMYHRYDKAVENMDRYNR 332
           +LS  Y Y  Y+    N + YN+
Sbjct: 84  SLSNNYNYSNYNNYNNNYNNYNK 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,770
Number of Sequences: 438
Number of extensions: 3007
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)