Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C22
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 29 0.37
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 0.49
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 28 0.85
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 28 1.1
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 1.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.0
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.0
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 3.4
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 3.4
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 3.4
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 26 4.5
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 26 4.5
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 25 6.0
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 25 6.0
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 25 6.0
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 25 6.0
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 25 6.0
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 25 6.0
SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.9
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 29.5 bits (63), Expect = 0.37
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 47 GSCIPGVDKPENNP---NGVDVSKLKKQCSSDNSPWKCLQEDRGDVAFVSSADLSNFDES 217
GS + G ++ N+P NG V+ KQ + N+ ++C D+ D+ FV + L+N +
Sbjct: 105 GSELKG-EESHNSPGTLNGTSVANASKQPNMPNATFRC---DKCDMMFVKQSGLTNHKRT 160
Query: 218 QYEL 229
+++
Sbjct: 161 YHQV 164
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 29.1 bits (62), Expect = 0.49
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 296 WLCYMWHSWRTSPVLRRRGSGRAVRTGSRRSWISRHLKRKRHLPY 162
W+ Y+WH + G G+ V+T + S+++ L ++H P+
Sbjct: 385 WMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL--RQHGPF 427
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 28.3 bits (60), Expect = 0.85
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 231 SSSYWLS-SKLDKSALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLG-LFSGLSTPG 58
SS Y L+ SK DK+A+ T + EH +F D TPLG + + S
Sbjct: 1438 SSGYTLNNSKFDKAAVSK--TLSAQDVSRLQKVSCGEHLYFGTDVFTPLGDMATSASMFS 1495
Query: 57 MQDPPKKSAKF 25
+ D +K+ F
Sbjct: 1496 LDDSSEKTDAF 1506
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 296 WLCYMWHSWRTSPVLRRRGSGRAVRTGSRRSWISRHLKRKRHLPY 162
W+ Y+WH + G G+ V+T S++ L K+H P+
Sbjct: 400 WMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL--KQHGPF 442
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 1.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 194 DLSNFDESQYELLCLNRDAGGRDSFSNYATCNIAMSPSRTWLSAKDFL---SDVSIAHTP 364
+++ F + + + R R SN ++ N+A +PS T D L S + H+P
Sbjct: 225 EMNGFSKKRDNVNIPKRTYSARSIPSNISSTNVATTPSNTIFEMDDTLKADSSSNEYHSP 284
Query: 365 LSLAQLLDTRSDLFN 409
+ T +DL N
Sbjct: 285 TNTLPSYHTEADLDN 299
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 2.0
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +2
Query: 212 ESQYELLCLNRDAGGRDSFSNYATCNIAMSPSRTWLS---AKDFLSDVSIAHTPLSLAQL 382
E +E + L +AG F+N + + +P +S A D L D +++ +
Sbjct: 248 EGTFETVNLTSEAGNEKEFNNDSVV-LNTTPKEMQISSLDAVDKLEDKPVSNDNIKANIE 306
Query: 383 LDTRSDLFNIYGEFLKNNNVFFSNDATGLATTEKLDFEKFKTVHD 517
T D + E N + FF ++ + LDF K V D
Sbjct: 307 SSTTVDRASSQLESENNESTFFVHNQNSSGQHQTLDFVASKPVTD 351
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 2.0
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 351 IETSERKSLADNQVLDGDMAMLHVA*LENESRPPASRFRQSSSYWLSSKLDK-SALETKA 175
+ETSE +N VL + L +EN S P +S ++ D AL+TKA
Sbjct: 486 VETSELSDSDENSVLSNKSSTLSKKVVENTS--PLKYTHSASKSFIGEVQDSLQALKTKA 543
Query: 174 TSPLS 160
P S
Sbjct: 544 HKPRS 548
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 119 QCSSDNSPWKCLQEDRGDVAFVSSADLSNFDESQYELLCLN 241
+C + + WKC+Q G +V S ++ D + + CL+
Sbjct: 123 KCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLD 163
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 44 GGSCIPGVDK-PENNPNGVDVSKLKKQCSSDNSPWKCLQEDRG 169
G SC D P P+ S+ KK C S P C QE +G
Sbjct: 222 GSSCCSKKDSSPSEKPSCC--SQEKKSCCSSKKPSCCSQEKKG 262
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 56 IPGVDKPENNPNGVDVSKLKKQCSSDNSP 142
+P DK N NG+ KL CS +P
Sbjct: 354 VPNCDKAYKNQNGLKYHKLHGHCSPITTP 382
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 138 LLSLEHCFFSFDTSTPLGLFSGLSTPGMQDPPKKSAKFLTHSPVLM 1
LL+L C F F PL + T ++D P +S + S VL+
Sbjct: 228 LLALGWCLFLFIAIKPLVYLLAVKTRSLKDKPSESFICIVLSMVLV 273
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 493 KVQFFGCSKTCCIVTEKNVVVLQEFAVNIEQVAPSVQQLGQAQ 365
K+QF C KT C+ +K++ + A N E A + QAQ
Sbjct: 122 KMQFI-CWKTICVSCDKSIQKQRLLARNPELTAEDAENRVQAQ 163
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 6.0
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 GVDKPENNPNGVD-VSKLKK-QCSSDNSPWKCLQEDRGDVAFVSSADLSNFDESQYELLC 235
G++ + + +G++ +S+L + +C S W+ LQ R V + FDE E+
Sbjct: 243 GLEGRDMSTSGINQLSRLARVECEHHASAWQQLQARRAYVKMELKRVTTEFDEKSVEISR 302
Query: 236 LNRDAG 253
L + G
Sbjct: 303 LEKLLG 308
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 6.0
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 195 TYPTSTRASTNCSA*TAT---PEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQS 353
T P S + T C T P SPT + C H++L R+ P S S
Sbjct: 150 TNPRSEQPHTPCKKGTKIKLKPPQSPLSPTTSLLARKCKHIDLDTFSRLDHPNSDS 205
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 77 ENNPNGVDVSKLKKQCSSDN-SPWKCLQEDRGDVAFVSSADLSNFDESQYELL 232
++N V V + K +++ S WKCL + D + S D ++ DE +LL
Sbjct: 923 KSNSKKVTVLRNKLNILNNSLSKWKCLIKKPSDFSEPVSMDFTSNDEQLVQLL 975
>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 6.0
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -2
Query: 126 EHCFFSFDTSTPLGL-FSGLS-TPGMQDPPKKSAKFLTHS 13
+HC +S D TPL + F L+ P P S F +H+
Sbjct: 211 KHCHYSLDPKTPLAMCFRNLAPVPSDSSPFVNSLYFDSHN 250
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 90 LGLFSGLSTPGMQDPPKKSAKFLTHSP 10
+ L +GL++P + PP + L HSP
Sbjct: 311 VSLATGLNSPSVSKPPSSATGPLYHSP 337
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.4 bits (53), Expect = 6.0
Identities = 9/35 (25%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Frame = +2
Query: 77 ENNPNGVDVSK------LKKQCSSDNSPWKCLQED 163
++NPN ++++K ++ +CS++ + WK Q++
Sbjct: 28 KDNPNNINIAKNLLNNNIQARCSTNEASWKLAQKE 62
>SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 7.9
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +2
Query: 41 FGGSCIPGVDKPENNPNGVDVSKLKKQCSSDNSPWKCLQEDRGDVAFVSSADLSNFDESQ 220
F CIP V+K + +PN V K + + S ++ L D A V+ S S
Sbjct: 41 FESECIPTVNKRDLDPNAEGVYKRSFDGNMNPSDFQLLPLAPRDGAIVNVDKESFSKRST 100
Query: 221 YELLCLNRDA-GGRDSFSNYATC 286
+ N G D SN C
Sbjct: 101 TNMFDFNFSCYFGSDGHSNDTLC 123
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,609,745
Number of Sequences: 5004
Number of extensions: 56968
Number of successful extensions: 207
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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