Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C21
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 64 1e-10
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 64 1e-10
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 64 1e-10
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 64 1e-10
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 64 1e-10
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 64 1e-10
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 47 2e-05
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 47 2e-05
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 47 2e-05
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 47 2e-05
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 47 2e-05
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 41 0.002
U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Fac... 32 0.70
AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein. 32 0.70
M26682-1|AAA36819.1| 156|Homo sapiens protein ( Human T-cell tr... 31 2.2
BC096058-1|AAH96058.1| 137|Homo sapiens LMO1 protein protein. 31 2.2
BC096057-1|AAH96057.1| 156|Homo sapiens LIM domain only 1 (rhom... 31 2.2
BC096056-1|AAH96056.1| 156|Homo sapiens LIM domain only 1 (rhom... 31 2.2
BC069793-1|AAH69793.1| 156|Homo sapiens LIM domain only 1 (rhom... 31 2.2
BC069752-1|AAH69752.1| 156|Homo sapiens LIM domain only 1 (rhom... 31 2.2
BC069673-1|AAH69673.1| 156|Homo sapiens LIM domain only 1 (rhom... 31 2.2
BC039512-1|AAH39512.1| 217|Homo sapiens LIM domain only 1 (rhom... 31 2.2
AJ277662-2|CAC14587.1| 156|Homo sapiens LIM domain only 1 prote... 31 2.2
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCP 389
+P QM CPSCN I++++ T L LC+ C C IP+ +D+ Q+ DHYCP
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCP 149
Query: 390 NCNSYIGMYQ 419
NC + +G Y+
Sbjct: 150 NCRALLGTYK 159
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCPN 392
P Q VCP C I T+I + ++ F C C C IP ++ ++ H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 393 CNSYIGMYQ 419
C +YI Y+
Sbjct: 197 CKAYIYTYK 205
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCPN 392
P Q VCP C I T+I + ++ F C C C IP ++ ++ H CP+
Sbjct: 137 PVQTVCPHCQQAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 393 CNSYIGMYQ 419
C +YI Y+
Sbjct: 197 CKAYIYTYK 205
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCPN 392
P Q VCP C I T+I + ++ F C C C IP ++ ++ H CP+
Sbjct: 54 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 113
Query: 393 CNSYIGMYQ 419
C +YI Y+
Sbjct: 114 CKAYIYTYK 122
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCPN 392
P Q VCP C I T+I + ++ F C C C IP ++ ++ H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 393 CNSYIGMYQ 419
C +YI Y+
Sbjct: 197 CKAYIYTYK 205
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCPN 392
P Q VCP C I T+I + ++ F C C C IP ++ ++ H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 393 CNSYIGMYQ 419
C +YI Y+
Sbjct: 197 CKAYIYTYK 205
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHLMAFILCIC-CPCFSC-IPYFMDSCQNADHYCPN 392
P Q VCP C I T+I + ++ F C C C IP ++ ++ H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 393 CNS 401
C +
Sbjct: 197 CKA 199
>U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Factor
protein.
Length = 228
Score = 32.3 bits (70), Expect = 0.70
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCI 320
+P QM CPSCN I++++ T L LC+
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCL 124
>AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein.
Length = 228
Score = 32.3 bits (70), Expect = 0.70
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCI 320
+P QM CPSCN I++++ T L LC+
Sbjct: 90 RPIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCL 124
>M26682-1|AAA36819.1| 156|Homo sapiens protein ( Human T-cell
translocation gene 1 (Ttg-1) mRNA, complete cds. ).
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC096058-1|AAH96058.1| 137|Homo sapiens LMO1 protein protein.
Length = 137
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC096057-1|AAH96057.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC096056-1|AAH96056.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC069793-1|AAH69793.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC069752-1|AAH69752.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC069673-1|AAH69673.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
>BC039512-1|AAH39512.1| 217|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 217
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 73 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 117
>AJ277662-2|CAC14587.1| 156|Homo sapiens LIM domain only 1 protein
protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 198 ILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPC 332
+L V PK Q C CN I R K K + C CC C
Sbjct: 12 MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDC 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,909,541
Number of Sequences: 237096
Number of extensions: 1066123
Number of successful extensions: 2114
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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