Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C21
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 54 4e-08
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 49 1e-06
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 43 8e-05
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 43 1e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 42 2e-04
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 42 2e-04
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 42 2e-04
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 40 6e-04
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 39 0.002
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 37 0.007
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 37 0.007
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 36 0.009
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 35 0.021
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 30 0.60
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 29 1.1
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 29 1.8
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical ... 29 1.8
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 28 3.2
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68882-9|CAD56233.1| 683|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68882-8|CAD56234.1| 738|Caenorhabditis elegans Hypothetical pr... 27 7.4
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 26 9.8
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 26 9.8
AF040647-6|AAR30205.3| 436|Caenorhabditis elegans Hypothetical ... 26 9.8
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 54.0 bits (124), Expect = 4e-08
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 180 MSNRNVILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLM-AFILCICCPCFSCIPYFM 356
M +I+++ P +++ CP C I+TR ++ T + A + C C +P+ +
Sbjct: 59 MPTSTIIIRLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCL 118
Query: 357 DSCQNADHYCPNCNSYIGMYQ 419
SC++ H CPNC + IG+++
Sbjct: 119 RSCKDIIHTCPNCRAMIGVHR 139
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +3
Query: 186 NRNVILQVGPKPS------QMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSCIP 347
N V++ PKP+ + C SC + T + + T ++ ++ IC + +P
Sbjct: 71 NPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLTWIVFILVLICFFPLAFVP 130
Query: 348 YFMDSCQNADHYCPNCNSYIGM 413
+ +DSC++A HYCP CN+ +G+
Sbjct: 131 FCLDSCKDAHHYCPRCNALLGI 152
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +3
Query: 219 PSQMVCPSCNTTIITRIENKTTTKTHL----MAFI---LCICCPCFSCIPYFMDSCQNAD 377
P +M CP C I++ IE + +AF+ L I CF C+P+F+D + +
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVN 102
Query: 378 HYCPNCNSYIGMY 416
H CP C ++G +
Sbjct: 103 HSCPACKKFLGRF 115
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 43.2 bits (97), Expect = 8e-05
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCI----CCPCFSC-IPYFMDSCQNADH 380
+P + CP C T + T++ FI+ I P F +P+ +++ ++A+H
Sbjct: 32 RPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEH 91
Query: 381 YCPNCNSYIGMYQ 419
YCP+C ++IG Y+
Sbjct: 92 YCPSCRAWIGTYR 104
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFI-LCICCPCFSCIPYFMDSCQNADHYCPN 392
+P CP CNT + TR+E + M F+ L + P C + +D +++ H CPN
Sbjct: 65 EPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVFFPLLCC--FCLDGFKDSRHSCPN 122
Query: 393 CNSYI 407
C + +
Sbjct: 123 CGTIL 127
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 189 RNVILQVGPK-PSQMVCPSCNTTIITRIENKTTTKTHLMAFI--LCICCPCFSCIPYFMD 359
R+V+ + K P VCP C TTI+T + L+ F C P C+ + D
Sbjct: 20 RHVVKETPIKTPYLDVCPKCQTTIMTSVTTHIGMCWWLICFFGTFLFCWPILICLCF--D 77
Query: 360 SCQNADHYCPNC 395
++ DH CPNC
Sbjct: 78 VSKDVDHNCPNC 89
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +3
Query: 165 MNNTDMSNRNVILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSCI 344
+N+ + V V P C +C T+ T+ E + + FI C+ PCF I
Sbjct: 4 VNSCAPKSEEVKYVVHKTPYLEFCTNCQETVTTKTE-QVFGMLNFALFITCLFLPCF--I 60
Query: 345 PYFMDSC-QNADHYCPNCNSYIG 410
F C + H CPNCN +G
Sbjct: 61 VCFWCRCFMDVHHRCPNCNKSLG 83
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 234 CPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSCIPYFMDSCQNADHYCPNCNSYIGM 413
C C T + TR+E+K L A + C F C F ++A H+CPNC S + +
Sbjct: 63 CTRCQTLVQTRVEHKIGIMWWLCATLSF--CFFFCCYLLFFPITKDAQHFCPNCGSLLAV 120
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 40.3 bits (90), Expect = 6e-04
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 204 QVGPKPS----QMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSCIPYFMDSCQN 371
Q+G P +VCP C II R +++ K LM +C CCP C+P C
Sbjct: 161 QIGGSPGGGVGALVCPKCRKGIIMRKQDRLRKKI-LMCLAVC-CCPLTCCLPLICICCNY 218
Query: 372 ADHYCPNCNSYIG 410
D C C G
Sbjct: 219 VD-ACGACGKKYG 230
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFI--LCICCPCFSCIPYFMDSCQNADHYCP 389
KP CP C T++ TR + T ++ FI C P C+ ++ H+CP
Sbjct: 82 KPYLEYCPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCL--CCAGSKDVKHFCP 139
Query: 390 NCNSYI 407
NC + +
Sbjct: 140 NCGTML 145
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICC--PCFSCIPYFMDSCQNADHYCP 389
KP + C C + + + +T L F+ I PC S +P F+ S + H CP
Sbjct: 948 KPLVLFCSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPC-SPLPCFLSSFSDFVHICP 1006
Query: 390 NCNSYIGMYQ 419
C+ +G ++
Sbjct: 1007 LCSHIMGRFR 1016
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICC--PCFSCIPYFMDSCQNADHYCP 389
KP + C C + + + +T L F+ I PC S +P F+ S + H CP
Sbjct: 948 KPLVLFCSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPC-SPLPCFLSSFSDFVHICP 1006
Query: 390 NCNSYIGMYQ 419
C+ +G ++
Sbjct: 1007 LCSHIMGRFR 1016
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSCIPYFMDSCQNADHYCPNC 395
KP Q CP C T++T +E + L+ IL I F ++A H+CPNC
Sbjct: 11 KPYQEYCPRCRCTVVTVVEYEMGCFAWLI-IILIIFVAFFLIYILCCIDIRDAIHHCPNC 69
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 35.1 bits (77), Expect = 0.021
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSCIPYFM--DSCQNADHYCP 389
+P Q+ C C +TR E + ++ I C+ F I Y++ DS ++ HYCP
Sbjct: 17 EPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLL---FWPICYWLCCDSSKDTMHYCP 73
Query: 390 NCNSYI 407
+C + +
Sbjct: 74 SCGTLL 79
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITRIENKTTTKTHLMAFI-LCICCPCFSCIPYFMDSCQNADHYCPN 392
+P CP C TR+E++ + FI + P C S ++ HYCP+
Sbjct: 17 EPYSEYCPKCQCNHTTRMESRRGNCWWIAFFIGFFLFFPI--CYWLCCQSSKDTLHYCPS 74
Query: 393 CNSYIGMYQ 419
C + + Q
Sbjct: 75 CGTLLATRQ 83
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 300 MAFILCICCPCFSCIPYFMDSCQNADHYCPNC 395
+AFI C C + C +F+ + H CPNC
Sbjct: 500 LAFIFCARCKEYICFSHFI---VDEKHLCPNC 528
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 150 FYKSKMNNTDMSNRNVILQVGPKPSQMVCPSCNTT 254
F K N N+N+++ GP S CP N T
Sbjct: 287 FPMKKKKNQLSGNKNILILFGPNTSLASCPQANLT 321
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 150 FYKSKMNNTDMSNRNVILQVGPKPSQMVCPSCNTT 254
F K N N+N+++ GP S CP N T
Sbjct: 235 FPMKKKKNQLSGNKNILILFGPNTSLASCPQANLT 269
>AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical
protein K11D12.8 protein.
Length = 303
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 122 NFNSLIYNFTQTQLKFD*KMFVNI*YLLLFI 30
NF IY F+QT K + FV YLL FI
Sbjct: 215 NFEISIYFFSQTNFKANYSFFVVFFYLLFFI 245
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 156 KSKMNNTDMSNRNVILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHL 299
KSK N DM R +++ KP + S + T+I +KT K+HL
Sbjct: 455 KSK-GNKDMEQRTIMID---KPGSITPKSKRSRTTTKIPHKTPHKSHL 498
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.5 bits (58), Expect = 4.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 216 KPSQMVCPSCNTTIITR 266
KPS + CP CN ++T+
Sbjct: 7 KPSLVTCPQCNAVVLTK 23
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 234 CPSCNTTIITRIE-NKTTTKTHLMAFILCICCPCFSCIPYFMD 359
CP C+ I N TK H C CF C+P D
Sbjct: 231 CPFCDKRFRNDISFNNHLTKKHPECAEFVQCLHCFKCLPSAAD 273
>Z68882-9|CAD56233.1| 683|Caenorhabditis elegans Hypothetical
protein C47E12.6b protein.
Length = 683
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 417 DTFQYRSCSLGNSGRHFDTNP*NTECRKNTDSICR 313
DTF+ S G SG+H DT +C N D+ CR
Sbjct: 168 DTFKSYSLETGASGKHIDTAA-ELKC-DNFDTKCR 200
>Z68882-8|CAD56234.1| 738|Caenorhabditis elegans Hypothetical
protein C47E12.6a protein.
Length = 738
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 417 DTFQYRSCSLGNSGRHFDTNP*NTECRKNTDSICR 313
DTF+ S G SG+H DT +C N D+ CR
Sbjct: 223 DTFKSYSLETGASGKHIDTAA-ELKC-DNFDTKCR 255
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 307 LYSAYAVRVFPAFRILW--IRVKMPTTIAQTAT 399
+YS + ++VFP ++W I+ K+ TT + T
Sbjct: 306 VYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTT 338
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 307 LYSAYAVRVFPAFRILW--IRVKMPTTIAQTAT 399
+YS + ++VFP ++W I+ K+ TT + T
Sbjct: 361 VYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTT 393
>AF040647-6|AAR30205.3| 436|Caenorhabditis elegans Hypothetical
protein F54D12.7 protein.
Length = 436
Score = 26.2 bits (55), Expect = 9.8
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 13 SLFYFFINSS---KYQIFTNIF*SNFSCVCVKL*IRELKFEKGVLS 141
S YFF +SS KY I + +F FSC L LK K V+S
Sbjct: 360 SRIYFFKSSSNISKYSILSFVFQKIFSCFLSSLETCFLKTTKPVIS 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,382,083
Number of Sequences: 27780
Number of extensions: 180301
Number of successful extensions: 542
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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