Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C21
         (426 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   2.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   5.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.6  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/49 (20%), Positives = 20/49 (40%)
 Frame = +3

Query: 195 VILQVGPKPSQMVCPSCNTTIITRIENKTTTKTHLMAFILCICCPCFSC 341
           ++++ G   S +    C TT+  R++     K   +  +  I C    C
Sbjct: 123 LMIEQGASLSLITMELCGTTLQNRLDEAILIKNERICILKSITCALQFC 171


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 178 ICQTGTLYYKLVRNPVRWSALRVT 249
           + +T  +YY L    + W   RVT
Sbjct: 205 LVETEPIYYNLTMVKLNWPKKRVT 228


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 309 ILCICCP 329
           ILC CCP
Sbjct: 404 ILCACCP 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,059
Number of Sequences: 438
Number of extensions: 2427
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)