Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C17
         (413 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053853-1|AAH53853.1|  291|Homo sapiens PHYHD1 protein protein.       73   4e-13
BC051300-1|AAH51300.1|  270|Homo sapiens PHYHD1 protein protein.       73   4e-13
BC009373-1|AAH09373.1|  297|Homo sapiens phytanoyl-CoA dioxygena...    73   4e-13
AL672142-7|CAI10843.1|  297|Homo sapiens phytanoyl-CoA dioxygena...    73   4e-13
AL672142-6|CAI10842.1|  291|Homo sapiens phytanoyl-CoA dioxygena...    73   4e-13
AL672142-5|CAI10841.1|  255|Homo sapiens phytanoyl-CoA dioxygena...    73   4e-13
AL672142-4|CAI10840.1|  177|Homo sapiens phytanoyl-CoA dioxygena...    73   4e-13
AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 ...    29   6.1  
AL672142-3|CAO72147.1|   66|Homo sapiens phytanoyl-CoA dioxygena...    29   8.1  
AL672142-2|CAO72146.1|   64|Homo sapiens phytanoyl-CoA dioxygena...    29   8.1  

>BC053853-1|AAH53853.1|  291|Homo sapiens PHYHD1 protein protein.
          Length = 291

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>BC051300-1|AAH51300.1|  270|Homo sapiens PHYHD1 protein protein.
          Length = 270

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>BC009373-1|AAH09373.1|  297|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 297

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>AL672142-7|CAI10843.1|  297|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 297

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>AL672142-6|CAI10842.1|  291|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 291

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>AL672142-5|CAI10841.1|  255|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 255

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>AL672142-4|CAI10840.1|  177|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 177

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAECEELVTAGMELTKNLPENEE-RAIFSTTESG--KQQLKDEYF 215
           + +QDG+ +LEGFL   EC  +     E+   +      R  FST E    + Q   +YF
Sbjct: 11  KFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF 70

Query: 216 FKSNDKISYFFEEAALGTDGKLKVDPSVSLNKVGHALHLLHPIFR 350
             S DKI +FFE+      G   V P  S+NK+GHALH   P+F+
Sbjct: 71  LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFK 115


>AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3
           protein.
          Length = 1093

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 407 SLNPSSWQPVLTLSLYVLTSEYRMKKV*SVPDLV**NARVNFQFPISTE 261
           S  P +W P + +SL    S  R +K  +VPD        +F FP+  E
Sbjct: 60  SKQPGTWDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEE 108


>AL672142-3|CAO72147.1|   66|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 66

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAEC 101
           + +QDG+ +LEGFL   EC
Sbjct: 11  KFQQDGFLVLEGFLSAEEC 29


>AL672142-2|CAO72146.1|   64|Homo sapiens phytanoyl-CoA dioxygenase
           domain containing 1 protein.
          Length = 64

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 45  QLEQDGYAILEGFLRPAEC 101
           + +QDG+ +LEGFL   EC
Sbjct: 11  KFQQDGFLVLEGFLSAEEC 29


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,303,919
Number of Sequences: 237096
Number of extensions: 986301
Number of successful extensions: 5481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5474
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)