Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C15
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-5|CAL36508.1| 709|Caenorhabditis elegans Hypothetical pr... 162 1e-40
Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical pr... 162 1e-40
Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical pr... 162 1e-40
AL023822-1|CAD21649.1| 672|Caenorhabditis elegans Hypothetical ... 28 3.2
AL021572-3|CAA16517.2| 672|Caenorhabditis elegans Hypothetical ... 28 3.2
AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical... 27 5.5
U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z46935-5|CAL36508.1| 709|Caenorhabditis elegans Hypothetical
protein M106.4c protein.
Length = 709
Score = 162 bits (393), Expect = 1e-40
Identities = 77/131 (58%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Frame = +2
Query: 98 DKVAILDAGSQYGKVIDRRVRELCVESDILPLDTPAYHLKETG-YRAIIISGGPNSVYAE 274
+++AILD G+QYGKVIDRRVREL V+S++ PL+T A L E G ++ IIISGGPNSV+
Sbjct: 23 ERIAILDFGAQYGKVIDRRVRELLVQSEMFPLNTTARTLIELGGFKGIIISGGPNSVFEP 82
Query: 275 DAPRYDSDIFKIGLPVLGICYGMQMLNKEFGGSVLRKEAREDGQYEVEIETTCPLFNRLE 454
+AP D +IF GLPVLGICYG Q++NK GG+V R+ REDG E++++T+ LFN L
Sbjct: 83 EAPSIDPEIFTCGLPVLGICYGFQLMNKLNGGTVTREHIREDGACEIQVDTSVHLFNGLH 142
Query: 455 KLQPVLLTHGD 487
K + VLLTHGD
Sbjct: 143 KTETVLLTHGD 153
>Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical
protein M106.4b protein.
Length = 794
Score = 162 bits (393), Expect = 1e-40
Identities = 77/131 (58%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Frame = +2
Query: 98 DKVAILDAGSQYGKVIDRRVRELCVESDILPLDTPAYHLKETG-YRAIIISGGPNSVYAE 274
+++AILD G+QYGKVIDRRVREL V+S++ PL+T A L E G ++ IIISGGPNSV+
Sbjct: 108 ERIAILDFGAQYGKVIDRRVRELLVQSEMFPLNTTARTLIELGGFKGIIISGGPNSVFEP 167
Query: 275 DAPRYDSDIFKIGLPVLGICYGMQMLNKEFGGSVLRKEAREDGQYEVEIETTCPLFNRLE 454
+AP D +IF GLPVLGICYG Q++NK GG+V R+ REDG E++++T+ LFN L
Sbjct: 168 EAPSIDPEIFTCGLPVLGICYGFQLMNKLNGGTVTREHIREDGACEIQVDTSVHLFNGLH 227
Query: 455 KLQPVLLTHGD 487
K + VLLTHGD
Sbjct: 228 KTETVLLTHGD 238
>Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical
protein M106.4a protein.
Length = 792
Score = 162 bits (393), Expect = 1e-40
Identities = 77/131 (58%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Frame = +2
Query: 98 DKVAILDAGSQYGKVIDRRVRELCVESDILPLDTPAYHLKETG-YRAIIISGGPNSVYAE 274
+++AILD G+QYGKVIDRRVREL V+S++ PL+T A L E G ++ IIISGGPNSV+
Sbjct: 106 ERIAILDFGAQYGKVIDRRVRELLVQSEMFPLNTTARTLIELGGFKGIIISGGPNSVFEP 165
Query: 275 DAPRYDSDIFKIGLPVLGICYGMQMLNKEFGGSVLRKEAREDGQYEVEIETTCPLFNRLE 454
+AP D +IF GLPVLGICYG Q++NK GG+V R+ REDG E++++T+ LFN L
Sbjct: 166 EAPSIDPEIFTCGLPVLGICYGFQLMNKLNGGTVTREHIREDGACEIQVDTSVHLFNGLH 225
Query: 455 KLQPVLLTHGD 487
K + VLLTHGD
Sbjct: 226 KTETVLLTHGD 236
>AL023822-1|CAD21649.1| 672|Caenorhabditis elegans Hypothetical
protein W06H3.3 protein.
Length = 672
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 236 IIISGGPNSVYAEDAPRYDSDIFKIGLPVLGICYGMQMLNKEFGGSVLRKEAREDGQYEV 415
+I+ GG + E K +P LG+C GMQ+ EF +VL + ++
Sbjct: 376 VIVPGGFDKRGVEGMINAAEYCRKNDVPYLGVCLGMQVAAIEFARNVLSIDGANSTEFNS 435
Query: 416 EI 421
++
Sbjct: 436 KL 437
>AL021572-3|CAA16517.2| 672|Caenorhabditis elegans Hypothetical
protein W06H3.3 protein.
Length = 672
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 236 IIISGGPNSVYAEDAPRYDSDIFKIGLPVLGICYGMQMLNKEFGGSVLRKEAREDGQYEV 415
+I+ GG + E K +P LG+C GMQ+ EF +VL + ++
Sbjct: 376 VIVPGGFDKRGVEGMINAAEYCRKNDVPYLGVCLGMQVAAIEFARNVLSIDGANSTEFNS 435
Query: 416 EI 421
++
Sbjct: 436 KL 437
>AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical
protein Y111B2A.4 protein.
Length = 459
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 68 RGTNGSSHGR-DKVAILDAGSQYGKVIDRRVRELCVE 175
+ TNGS G ++ ++D GS + +++D R+R++ VE
Sbjct: 238 KSTNGSDGGDGERPVVVDLGS-HDELVDERIRQMEVE 273
>U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical
protein F48B9.1 protein.
Length = 539
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 423 SISTSYCPSSLASFRRTDPPNSLFNICIP*HMPRTGRPIL 304
S +TS SS+ASFRR S+ N C + P T R ++
Sbjct: 296 SRATSLFSSSIASFRRPISHFSIDNSCFDINDPPTQRSLM 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,749,259
Number of Sequences: 27780
Number of extensions: 246958
Number of successful extensions: 737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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