Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C14
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.4  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 405 WSNMLLHLKQSPEDQKCT 458
           W +   H+   PED++CT
Sbjct: 190 WEHKETHIDWQPEDEECT 207


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 105 RVGVVIHYRNNRASTQHYT 161
           R G+ +HYR+ R    +YT
Sbjct: 126 RQGLTLHYRSKRRGFVYYT 144


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 465 VSTCTFGLQEIA 430
           +S C FGLQEIA
Sbjct: 9   LSICLFGLQEIA 20


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 509 LSFKNFTFK*NINSE 465
           ++++ FT+K NINS+
Sbjct: 496 MNYERFTYKININSD 510


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 509 LSFKNFTFK*NINSE 465
           ++++ FT+K NINS+
Sbjct: 496 MNYERFTYKININSD 510


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 248 LDRTVINSRKTNVTTN 201
           +++ VIN  KT +TTN
Sbjct: 871 VEKDVINDVKTQITTN 886



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 227 SRKTNVTTNLTIFI 186
           S  TNVTTNLT  +
Sbjct: 954 SNVTNVTTNLTTIL 967


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 268 SLNEVGIYEIE 300
           S NEVG YE+E
Sbjct: 252 SQNEVGFYEVE 262


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,844
Number of Sequences: 438
Number of extensions: 3212
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)