Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C13
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    25   0.23 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   3.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   3.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   4.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   8.5  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 341 AIGVSNIIGRILCGLVSSMPKM 406
           A+GV NI  R+L  LV+ M +M
Sbjct: 285 AVGVGNIYDRVLSELVNKMKEM 306


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 316 IIDQFSCLCNWSI*YYWS 369
           +I    CLC WSI   W+
Sbjct: 48  VIITIGCLCIWSIFNKWN 65


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 317 IHSFYCRQLFVLCTY 273
           I+ FYC  + +LC Y
Sbjct: 285 IYYFYCALIILLCIY 299


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 29  RSKFN*TSTVHFKNFTRYHLAVTHVPTK 112
           RS  N T++     F  YH+ +  VPTK
Sbjct: 42  RSFLNITASAVLLPFAIYHIFMHIVPTK 69


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 264 KNPNIVKKPLKARSTNVGDLK 202
           +NP+   KP K RS  + DLK
Sbjct: 682 QNPSTGSKPGKPRSAFLTDLK 702


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 150 SAPKLLRERWPLCW 191
           S P+L   +WP  W
Sbjct: 72  SVPRLGHPQWPFAW 85


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 314 HSFYCRQLFVLCTYTVQKILTS*RNHS 234
           H ++  +LF+LC  ++ + +     HS
Sbjct: 12  HVWFLSKLFLLCPRSIDEKIKRQERHS 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,335
Number of Sequences: 336
Number of extensions: 1877
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)