Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C12
         (451 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   1.6  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    23   3.8  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   5.0  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   5.0  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 89  GPQTPTALANPHAKRGDYGNSSLI 18
           GP  P+    P  ++GD G+S L+
Sbjct: 582 GPSGPSGPLGPQGEKGDRGDSGLM 605



 Score = 23.4 bits (48), Expect = 3.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 107 GSSIL*GPQTPTALANPHAKRGDYGNSSLI 18
           G+  L GPQ    L  P  ++GD G    I
Sbjct: 609 GNDGLPGPQGQRGLPGPQGEKGDQGPPGFI 638


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 197 YNHIRKIPRRMVVVLSRHV 253
           Y HIR  P + VV L+RH+
Sbjct: 4   YYHIRSPPCQPVVFLARHL 22


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 272 HHLKTTEHVGIRLLPFDAEF 213
           H+L+     G R+ PFD EF
Sbjct: 306 HNLENPWRHGTRMAPFDQEF 325


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 272 HHLKTTEHVGIRLLPFDAEF 213
           H+L+     G R+ PFD EF
Sbjct: 306 HNLENPWRHGTRMAPFDQEF 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,361
Number of Sequences: 2352
Number of extensions: 12501
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)