Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C11
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 90 4e-19
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 90 4e-19
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 90 4e-19
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 79 8e-16
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 79 8e-16
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 79 8e-16
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 79 8e-16
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 71 4e-13
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 31 0.21
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 31 0.21
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 31 0.21
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 31 0.21
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 2.0
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 2.0
Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical pr... 27 4.6
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 27 4.6
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 27 4.6
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 27 4.6
Z92777-11|CAB07168.2| 338|Caenorhabditis elegans Hypothetical p... 27 6.1
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 27 6.1
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 90.2 bits (214), Expect = 4e-19
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
++P HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+
Sbjct: 88 YNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKT 147
Query: 209 DDFGRTDHPDSRKTGNAGGRVACG 280
DD GR S+ TGNAG R+ACG
Sbjct: 148 DDLGRGTSDQSKTTGNAGSRLACG 171
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 90.2 bits (214), Expect = 4e-19
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
++P HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+
Sbjct: 88 YNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKT 147
Query: 209 DDFGRTDHPDSRKTGNAGGRVACG 280
DD GR S+ TGNAG R+ACG
Sbjct: 148 DDLGRGTSDQSKTTGNAGSRLACG 171
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 90.2 bits (214), Expect = 4e-19
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
++P HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+
Sbjct: 88 YNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKT 147
Query: 209 DDFGRTDHPDSRKTGNAGGRVACG 280
DD GR S+ TGNAG R+ACG
Sbjct: 148 DDLGRGTSDQSKTTGNAGSRLACG 171
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
F+P K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 209 DDFGR---TDHPDSRKTGNAGGRVACGV 283
DD G +S+KTGNAG R ACGV
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAACGV 151
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
F+P K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 209 DDFGR---TDHPDSRKTGNAGGRVACGV 283
DD G +S+KTGNAG R ACGV
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAACGV 151
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
F+P K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 209 DDFGR---TDHPDSRKTGNAGGRVACGV 283
DD G +S+KTGNAG R ACGV
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAACGV 151
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 79.4 bits (187), Expect = 8e-16
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
F+P K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 86 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 145
Query: 209 DDFGR---TDHPDSRKTGNAGGRVACGV 283
DD G +S+KTGNAG R ACGV
Sbjct: 146 DDLGEGVGDKAEESKKTGNAGARAACGV 173
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 70.5 bits (165), Expect = 4e-13
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +2
Query: 29 FHPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 208
F+P HG RHVGDLGN E + +KI D +++ GA+ ++GR++V+H
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDR 143
Query: 209 DDFGR---TDHPDSRKTGNAGGRVACGV 283
DD G+ +S KTGNAG R ACGV
Sbjct: 144 DDLGQGIDDKAEESLKTGNAGARAACGV 171
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 232 PRFEKNRQRWWTRRLRCHRNTVKHLSISLSFM 327
P+F KNR W LR N +KH ISLS++
Sbjct: 111 PKFRKNRSLW----LRMEMNRIKHKLISLSYL 138
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 232 PRFEKNRQRWWTRRLRCHRNTVKHLSISLSFM 327
P+F KNR W LR N +KH ISLS++
Sbjct: 111 PKFRKNRSLW----LRMEMNRIKHKLISLSYL 138
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 232 PRFEKNRQRWWTRRLRCHRNTVKHLSISLSFM 327
P+F KNR W LR N +KH ISLS++
Sbjct: 111 PKFRKNRSLW----LRMEMNRIKHKLISLSYL 138
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 232 PRFEKNRQRWWTRRLRCHRNTVKHLSISLSFM 327
P+F KNR W LR N +KH ISLS++
Sbjct: 39 PKFRKNRSLW----LRMEMNRIKHKLISLSYL 66
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 28.3 bits (60), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 143 GRSYQSCWSSSCQIPRYQDP 84
GR Y+SCW + +P Y+ P
Sbjct: 349 GRRYKSCWHNELGLPIYEGP 368
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 28.3 bits (60), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 143 GRSYQSCWSSSCQIPRYQDP 84
GR Y+SCW + +P Y+ P
Sbjct: 349 GRRYKSCWHNELGLPIYEGP 368
>Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical
protein F16H6.3 protein.
Length = 257
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 216 KSSARSCRTTALPRIPCAPVM-ARC 145
K+SA +CR PR+ CA ++ A+C
Sbjct: 112 KTSAYNCRNADFPRLNCATILPAQC 136
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.1 bits (57), Expect = 4.6
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +2
Query: 5 RLWLHRFSFHPENKE------HGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGA 166
R WL R+S PE++E HG +R D+ S+ D +
Sbjct: 207 RNWLMRYSKSPESREEKKKDKHGREEKRDRRRRSNDRHGRDRRSRSRSQSRDRNRRRDDR 266
Query: 167 HGILGRAVVLHERADDFGRTDHPDSRKT 250
G GR V +ER D GR + D R++
Sbjct: 267 SGRDGR-VGRNERDDRSGRDERRDDRRS 293
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 27.1 bits (57), Expect = 4.6
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +2
Query: 5 RLWLHRFSFHPENKE------HGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGA 166
R WL R+S PE++E HG +R D+ S+ D +
Sbjct: 207 RNWLMRYSKSPESREEKKKDKHGREEKRDRRRRSNDRHGRDRRSRSRSQSRDRNRRRDDR 266
Query: 167 HGILGRAVVLHERADDFGRTDHPDSRKT 250
G GR V +ER D GR + D R++
Sbjct: 267 SGRDGR-VGRNERDDRSGRDERRDDRRS 293
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 27.1 bits (57), Expect = 4.6
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +2
Query: 5 RLWLHRFSFHPENKE------HGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGA 166
R WL R+S PE++E HG +R D+ S+ D +
Sbjct: 207 RNWLMRYSKSPESREEKKKDKHGREEKRDRRRRSNDRHGRDRRSRSRSQSRDRNRRRDDR 266
Query: 167 HGILGRAVVLHERADDFGRTDHPDSRKT 250
G GR V +ER D GR + D R++
Sbjct: 267 SGRDGR-VGRNERDDRSGRDERRDDRRS 293
>Z92777-11|CAB07168.2| 338|Caenorhabditis elegans Hypothetical
protein C17H1.4 protein.
Length = 338
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 232 VVSAAEIISPLV*NHSPAENPVCSGNGEMRVDHINLAGVVLVKFRVTK 89
V+ AE + +V N + N + GNG+ ++DH + + + VTK
Sbjct: 184 VLKTAEENNAIVLNETQRTNEIKLGNGKNQIDHDSRMAALKERNMVTK 231
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 80 VGDLGNAEFDKNYSSKIDMIDPHLAITGAH 169
+G LG K Y S + IDPHLA H
Sbjct: 2431 LGLLGVFSVPKVYESNQEAIDPHLATISGH 2460
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 80 VGDLGNAEFDKNYSSKIDMIDPHLAITGAH 169
+G LG K Y S + IDPHLA H
Sbjct: 147 LGLLGVFSVPKVYESNQEAIDPHLATISGH 176
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 80 VGDLGNAEFDKNYSSKIDMIDPHLAITGAH 169
+G LG K Y S + IDPHLA H
Sbjct: 513 LGLLGVFSVPKVYESNQEAIDPHLATISGH 542
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 80 VGDLGNAEFDKNYSSKIDMIDPHLAITGAH 169
+G LG K Y S + IDPHLA H
Sbjct: 2427 LGLLGVFSVPKVYESNQEAIDPHLATISGH 2456
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 80 VGDLGNAEFDKNYSSKIDMIDPHLAITGAH 169
+G LG K Y S + IDPHLA H
Sbjct: 165 LGLLGVFSVPKVYESNQEAIDPHLATISGH 194
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 26.6 bits (56), Expect = 6.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 80 VGDLGNAEFDKNYSSKIDMIDPHLAITGAH 169
+G LG K Y S + IDPHLA H
Sbjct: 2550 LGLLGVFSVPKVYESNQEAIDPHLATISGH 2579
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,104,151
Number of Sequences: 27780
Number of extensions: 153249
Number of successful extensions: 477
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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