Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C04
         (394 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    51   5e-09
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   7.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.6  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 50.8 bits (116), Expect = 5e-09
 Identities = 26/72 (36%), Positives = 39/72 (54%)
 Frame = +3

Query: 177 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLKDPAKRTKLRFNTRVRFE 356
           G+ +  +R + +P V G +  H+ P       S      +  K P KR ++RF TRV+ +
Sbjct: 19  GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78

Query: 357 ERYKSGKNKWFF 392
           E  KSG+NKWFF
Sbjct: 79  EGSKSGRNKWFF 90


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 60  AGRKAIVVKNYDEGTSDKP 116
           AG+K   VK  DE   +KP
Sbjct: 73  AGKKPENVKKEDESDEEKP 91


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 210 KPFVKGVNYNHLMPTRYS 263
           K F   VN  HL+ T+Y+
Sbjct: 83  KNFTNIVNLTHLLETQYA 100


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 261 SVDFSFEKFSA 293
           SVDF F+ FSA
Sbjct: 81  SVDFLFDNFSA 91


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 261 SVDFSFEKFSA 293
           SVDF F+ FSA
Sbjct: 314 SVDFLFDNFSA 324


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 261 SVDFSFEKFSA 293
           SVDF F+ FSA
Sbjct: 314 SVDFLFDNFSA 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,371
Number of Sequences: 336
Number of extensions: 2059
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)