Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C04
(394 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein L27|Schizosac... 150 7e-38
SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein L27|Schizosacch... 147 5e-37
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 29 0.26
SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces p... 28 0.45
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 28 0.59
SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyce... 27 0.79
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 27 1.4
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 27 1.4
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 26 2.4
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ... 26 2.4
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 3.2
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 25 3.2
SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces p... 25 3.2
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 3.2
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 25 4.2
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 25 4.2
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 4.2
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 4.2
SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr 2... 25 4.2
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 25 5.5
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 24 9.7
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 24 9.7
>SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 150 bits (364), Expect = 7e-38
Identities = 65/131 (49%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M KI+KPGKV L+ GR+AG+K ++++ D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
+I +RS++KPF+K VNYNHLMPTRY+++ K +A K+P +R+ R + FEE
Sbjct: 61 RIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEE 120
Query: 360 RYKSGKNKWFF 392
+Y+SGK+ WFF
Sbjct: 121 KYQSGKSAWFF 131
>SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 3|||Manual
Length = 136
Score = 147 bits (357), Expect = 5e-37
Identities = 63/131 (48%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
M KI+KPGKV LV GR+AG+K ++++N D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
+I KRS++KPF+K +NYNHLMPTRY+++ K + +P++R+ + + FEE
Sbjct: 61 RIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEE 120
Query: 360 RYKSGKNKWFF 392
+Y++GK+ WFF
Sbjct: 121 KYQTGKSAWFF 131
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 29.1 bits (62), Expect = 0.26
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 245 NANPLFCRLQLRKIQCTGPQRPS*AHEAAFQH 340
N +P+ QL K++ T PQ+PS A +++F H
Sbjct: 271 NISPVSPFAQLVKLEPTSPQKPSFALDSSFSH 302
>SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 195
Score = 28.3 bits (60), Expect = 0.45
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 98
K+ + PG V ++L+GR+ G++ +V+ ++
Sbjct: 47 KLRASLAPGTVCILLAGRFRGKRVVVLSQLED 78
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 27.9 bits (59), Expect = 0.59
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 207 IKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLKDPAKRTKL-RFNTR 344
+ PF K Y H + T S S KF + P K+TKL R +TR
Sbjct: 39 VSPFFKKERYKHHLETNVSSHQSATKFIEPE-PSPTKKTKLTRRDTR 84
>SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 0.79
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 12 KIMKPGKVVLVLSGRYAGRKAIVVKNYD 95
+ ++ G+VVLV G Y G+ A++V D
Sbjct: 6 RYVEVGRVVLVTKGEYTGKLAVIVDIVD 33
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 26.6 bits (56), Expect = 1.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 8 G*DYETWKSGAGPQRPVR 61
G + E WKSGAG Q P++
Sbjct: 435 GMEVEVWKSGAGAQLPMK 452
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -3
Query: 389 EPFVLSALVSLFETDPCVETQLR---ALSWVF 303
EPF ++ ++S ++ PCV T L L+W F
Sbjct: 120 EPFQIARIISFEKSRPCVSTNLYDSVRLNWYF 151
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 2.4
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 141 IDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYS-VDFSFEKFSAQDLKDPAK 317
ID+ +K K K K +KR IKP G Y +P+ ++ + F + + D K
Sbjct: 434 IDKKKKKKKKNNKKKKKNKRKNIKPGPLGPAY---VPSLFTPISFKQYFLNTSNYMDATK 490
Query: 318 RTKLRF 335
T++ +
Sbjct: 491 DTEISY 496
>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 25.8 bits (54), Expect = 2.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -1
Query: 133 TKACPYGLSDV-PSS*FFTTMALRPAY--RPLRTSTTFPGFIIL 11
T AC YGL +V S+ FF +++R Y R ++ FP I++
Sbjct: 73 TMACNYGLKNVFSSASFFREVSVRMVYYVRYIQWLINFPLIIVM 116
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.4 bits (53), Expect = 3.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 188 FIFSHPFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFT 66
FI F ++ D ESM F+R A +++ Y G T
Sbjct: 1092 FICQQVFQSVILAIHDPYFESMQSDFIRLACIILSYSQGIT 1132
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 25.4 bits (53), Expect = 3.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 177 GKNKIHKRSKIKPFVKGVNYNHLMPTR-YSVDFSFEKFSAQDLKDP 311
G + I R K P K VNYNH + S +F K D+ DP
Sbjct: 28 GNHWIFARFKFYPLNKIVNYNHFHSSSCQSEAKNFYKQFEGDISDP 73
>SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 10 VRL*NLEKWCWSSAAGTQAVKPLS*RITTRAHLTNHTDMLSS 135
+RL L ++CWS ++ S R +LT ++++L++
Sbjct: 94 LRLQRLRQYCWSGGKRMESCLDTSLSTYERDYLTRYSELLAA 135
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 3.2
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 271 SASKNSVHRTSKT--QLSARSCVSTQGSVSKRDTRAERTNGS 390
SAS +SVH +S T S+ S S GS S +R+ T+ S
Sbjct: 516 SASLSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSS 557
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.0 bits (52), Expect = 4.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 112 LSDVPSS*FFTTMALRPAYRPLRTSTTFPG 23
L ++P + FF T+ AY P S T G
Sbjct: 689 LEEIPYNKFFKTVEKNEAYNPSSKSATIDG 718
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 25.0 bits (52), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 237 NHLMPTRYSVDFSFEKFSAQDLKDPAKRTKLR 332
NH++ + S ++ EK A LKD K T+L+
Sbjct: 35 NHILYSNRSACYASEKDYADALKDATKCTELK 66
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.0 bits (52), Expect = 4.2
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 311 WVFEVLCTEFFEAEVYRITGWH*MIVVYTFDERLDFRPLVNF 186
WVF T++ +Y + W +Y +D +VNF
Sbjct: 224 WVFNKNYTQYIPVSLYDLQSWLGAPCIYVYDCSAAGNIIVNF 265
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.0 bits (52), Expect = 4.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 264 VDFSFEKFSAQDLKDPAKRTKLRFNTRVRFEER 362
VD++ E+F DP+ + NT ++ E+R
Sbjct: 821 VDYAIERFCQFTALDPSSVPGTQLNTAIKVEDR 853
>SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 4.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 177 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKF 287
G+ KIH + +++ N+ H+ TR+ F KF
Sbjct: 85 GEKKIHFNQFYQEYIRDKNHVHMNATRWHTLSEFCKF 121
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 24.6 bits (51), Expect = 5.5
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 132 VAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFE---KFSAQDL 302
++GI++ + HKR + HKR + N PT S + + F Q L
Sbjct: 501 ISGINQKQKPSHKRGSLSASHKRDAAWSLLYKATSNKSRPTTTSTELKTDARLNFQRQVL 560
Query: 303 KDPAKR 320
+D +R
Sbjct: 561 QDFRQR 566
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 23.8 bits (49), Expect = 9.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 152 VSVDAG-DESMSVWFVRCALVVILYDNGFTACVPAA 48
V++D G D+ + +W + C L V+L TA +P A
Sbjct: 346 VNLDGGYDDKVDIWSLGCVLYVML-----TASIPFA 376
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 23.8 bits (49), Expect = 9.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 271 SASKNSVHRTSKTQLSA---RSCVSTQGSVSKRDTRAERTN 384
+AS S+ +T+ TQLSA S +S K R+ TN
Sbjct: 383 AASTQSILKTAPTQLSASAKTSAISLPEVAKKERNRSNSTN 423
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,730,367
Number of Sequences: 5004
Number of extensions: 34422
Number of successful extensions: 104
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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