Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_C04
(394 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 192 3e-49
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 192 3e-49
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 192 3e-49
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 192 3e-49
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 192 3e-49
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 192 3e-49
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 192 3e-49
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 192 3e-49
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 171 5e-43
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 49 6e-06
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 30 2.4
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 30 2.4
AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein. 30 2.4
AF077517-1|AAC70866.1| 100|Homo sapiens immunoglobulin heavy ch... 29 5.5
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 29 7.2
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 29 7.2
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 29 7.2
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein. 29 7.2
BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein. 29 7.2
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.2
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 28 9.5
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 28 9.5
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 28 9.5
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 28 9.5
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 192 bits (469), Expect = 3e-49
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Frame = +3
Query: 6 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 185
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 186 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEE 359
KI KRSKIK FVK NYNHLMPTRYSVD +K + +DPA + K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 360 RYKSGKNKWFF 392
RYK+GKNKWFF
Sbjct: 121 RYKTGKNKWFF 131
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 171 bits (417), Expect = 5e-43
Identities = 80/120 (66%), Positives = 93/120 (77%), Gaps = 2/120 (1%)
Frame = +3
Query: 39 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 218
LVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
Query: 219 VKGVNYNHLMPTRYSVDFSFEK--FSAQDLKDPAKRTKLRFNTRVRFEERYKSGKNKWFF 392
VK NYNHLMPTRYSVD +K + +DPA + K R +V+FEERYK+GKNKWFF
Sbjct: 76 VKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFF 135
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 303 KDPAKRTKLRFNTRVRFEERYKSGKNKWFF 392
+DPA + K R +V+FEERYK+GKNKWFF
Sbjct: 6 RDPALKRKARREAKVKFEERYKTGKNKWFF 35
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 129 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLKD 308
F+ G++ + K K K K HK+ KPF KG++ + P D EK + Q +K+
Sbjct: 135 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 193
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 129 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLKD 308
F+ G++ + K K K K HK+ KPF KG++ + P D EK + Q +K+
Sbjct: 135 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 193
>AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein.
Length = 1463
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 129 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLKD 308
F+ G++ + K K K K HK+ KPF KG++ + P D EK + Q +K+
Sbjct: 159 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 217
>AF077517-1|AAC70866.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 231 NYNHLMPTRY--SVDFSFEKFSAQDLKDPAKRTKLRFNTRVRFEERYKSGKNKW 386
NYN + +R SVD S +FS + A T + + R R + Y SG N W
Sbjct: 46 NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRGRDGYNSGSNYW 99
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 78 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 110
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein.
Length = 332
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 96 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 218
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 73 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 110
>BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein.
Length = 323
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 96 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 218
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 64 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 101
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 3 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 101
K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 147 RYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLK--DPAKR 320
R+ +K HK K+K HK S + K + H ++ E A D + PAKR
Sbjct: 42 RHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKH----KHKKHKRKEVIDASDKEGMSPAKR 97
Query: 321 TKL 329
TKL
Sbjct: 98 TKL 100
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 147 RYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLK--DPAKR 320
R+ +K HK K+K HK S + K + H ++ E A D + PAKR
Sbjct: 42 RHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKH----KHKKHKRKEVIDASDKEGMSPAKR 97
Query: 321 TKL 329
TKL
Sbjct: 98 TKL 100
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 147 RYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLK--DPAKR 320
R+ +K HK K+K HK S + K + H ++ E A D + PAKR
Sbjct: 42 RHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKH----KHKKHKRKEVIDASDKEGMSPAKR 97
Query: 321 TKL 329
TKL
Sbjct: 98 TKL 100
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 28.3 bits (60), Expect = 9.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 147 RYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAQDLK--DPAKR 320
R+ +K HK K+K HK S + K + H ++ E A D + PAKR
Sbjct: 63 RHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKH----KHKKHKRKEVIDASDKEGMSPAKR 118
Query: 321 TKL 329
TKL
Sbjct: 119 TKL 121
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,930,423
Number of Sequences: 237096
Number of extensions: 1169823
Number of successful extensions: 2605
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2590
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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