Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C04
         (394 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.31 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   2.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   2.2  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    21   5.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   8.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 356 FETDPCVETQLRALSWVFEVLCTEFFEAEVY 264
           +ETDPCV    R   W++        E E+Y
Sbjct: 715 YETDPCVRYYPRRKEWLYLHRARSESEFEMY 745


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 22   NLEKWCWSSAAGTQAVKPLS*RITTRAHLTNHTDMLSSPAS 144
            NL++   S  A +  +K L    T + +LT+H  + SSP+S
Sbjct: 1447 NLDELQLSRHATSHELKGLLCGNTYQLYLTSHNKIGSSPSS 1487


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 22   NLEKWCWSSAAGTQAVKPLS*RITTRAHLTNHTDMLSSPAS 144
            NL++   S  A +  +K L    T + +LT+H  + SSP+S
Sbjct: 1443 NLDELQLSRHATSHELKGLLCGNTYQLYLTSHNKIGSSPSS 1483


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
          protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 76 MALRPAYRP 50
          MA+RP YRP
Sbjct: 1  MAIRPVYRP 9


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 221 DERLDFRPLVNFIFSHPFMNLARVSV 144
           +E  +FR +   +F+  FMN+ R+ +
Sbjct: 200 NENSEFRRMGREVFAVNFMNVMRMKL 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,989
Number of Sequences: 438
Number of extensions: 2503
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)