Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C03
         (458 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E9W7 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_Q61AU9 Cluster: Putative uncharacterized protein CBG136...    33   3.9  
UniRef50_UPI00004983BB Cluster: hypothetical protein 3.t00123; n...    32   6.8  

>UniRef50_A2E9W7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1239

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -3

Query: 285 LYYDLSNSKIADHFSAQLLSDETDNDFRKFLPIPRTSHHNTKRVNIILS 139
           L+  L N+++ +H      + E + +F  F+PIP T     K + + LS
Sbjct: 841 LFVQLGNNEVTEHQQKIPSNGENNQEFEAFIPIPETELPGKKEIKVWLS 889


>UniRef50_Q61AU9 Cluster: Putative uncharacterized protein CBG13612;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG13612 - Caenorhabditis
           briggsae
          Length = 479

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -2

Query: 142 QRPTSLSNCTLYTITPLISLLPPTKP 65
           Q+PT+++  T  TIT L++ LPPT P
Sbjct: 330 QKPTTITTTTKATITTLVTTLPPTVP 355


>UniRef50_UPI00004983BB Cluster: hypothetical protein 3.t00123; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 3.t00123 - Entamoeba histolytica HM-1:IMSS
          Length = 305

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +3

Query: 204 ENHYQFHHSEVGPRSDQQSCYCLNHNTIKIFEKM*CN*LTTLHILQVFYFYFSEVIINTL 383
           +N YQ  +  +GP S + SC C N+    I  K  C   +T +I+ + Y     + I  +
Sbjct: 160 QNAYQIFYQSLGPFSCRYSCNCQNY----IRYKQKCIYHSTTYIILMLYILSGTICIGHI 215

Query: 384 I---YAKINSV 407
           +   YA +N +
Sbjct: 216 LIHGYATVNQI 226


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,642,861
Number of Sequences: 1657284
Number of extensions: 5669194
Number of successful extensions: 13749
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13741
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)