Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C03
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.3  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   5.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   5.1  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -3

Query: 252 DHFSAQLLSDET--DNDF-RKFLPIPRTSHHNTKRVN 151
           D  S Q L DE   +  F ++ LP+PRT + N   +N
Sbjct: 28  DRASIQRLEDEMVQERSFSQRALPVPRTQNRNGSPIN 64


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 342 VFYFYFSEVIINTLIYAKINSVKV 413
           +F+F  S  +IN LIY   + V +
Sbjct: 456 IFFFGMSNSLINPLIYGAFHLVPI 479


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 342 VFYFYFSEVIINTLIYAKINSVKV 413
           +F+F  S  +IN LIY   + V +
Sbjct: 457 IFFFGMSNSLINPLIYGAFHLVPI 480


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,404
Number of Sequences: 2352
Number of extensions: 6434
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)