Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_C02
         (479 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YEJ2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella ve...    32   5.8  

>UniRef50_Q4YEJ2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 60

 Score = 32.7 bits (71), Expect = 4.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 403 TNSLHLNFISYTILHKLFYIIALHLH*NKNHSLPKLLYNYN 281
           T   H  +IS+ ILH   YIIALH      +++ +LL+ Y+
Sbjct: 5   TTYAHTTYISFAILHIYIYIIALHPLTVSIYAIYQLLHTYS 45


>UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 349

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = -1

Query: 458 PCDVSIAT-GQLNKLCQNHNQ*FAS*FHLLHNITQTILYHCSSFTLKQEPFFT*TII*LQ 282
           P D+ +AT G L K  Q     F+   HL+ +   T ++  S  +L  E   T  +  LQ
Sbjct: 129 PVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADT-MFDASFKSLTMEILHTINVSQLQ 187

Query: 281 LNYHYLIASGCLLLDCCVVSHNIFRALPICNIG 183
           L Y++ +      L C   S    + L  C+ G
Sbjct: 188 LIYNFTVYQSLQRLSCIEASEKTVKHLETCSSG 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,183,160
Number of Sequences: 1657284
Number of extensions: 7461961
Number of successful extensions: 12430
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12426
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)