Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B23
(437 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1393.13 |||DUF89 family protein|Schizosaccharomyces pombe|ch... 27 0.96
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 27 1.3
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 27 1.7
SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|c... 27 1.7
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 26 2.9
SPAC27D7.06 |||electron transfer flavoprotein alpha subunit|Schi... 26 2.9
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 3.9
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 25 6.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 24 8.9
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 24 8.9
SPAC1250.07 |sfc7||TFIIIC subunit Sfc7|Schizosaccharomyces pombe... 24 8.9
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 24 8.9
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 24 8.9
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 24 8.9
>SPCC1393.13 |||DUF89 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 0.96
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 75 YLQLGDNLKAAQTFNESYQNYVREPF-KVWSELGRPGVGAVNFFTGMGGF 221
Y QL +L+ + ES +N + F K+WS+L + G ++F GF
Sbjct: 208 YEQL-QSLQGQKAVEESQKNILVNDFPKIWSKLSKVRHGRIDFVLDNAGF 256
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 1.3
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 8 SYYESVTREG-W-SSYDLEYALYRLLTVRRQFKSS 106
SY++ RE W S++D+E Y+L+ + +F+ S
Sbjct: 365 SYHDPFNREALWLSNFDMENVYYKLIGILNRFRKS 399
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.6 bits (56), Expect = 1.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 174 RPGVGAVNFFTGMGGFLQALIFGYAGLSIHLDRLEFNRPQLPPEATNFKIRGIKYLGASL 353
R V AVN G+G + F ++ L++ ++R F + P + +I GI L +++
Sbjct: 494 RKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERNSFRETESPKPFLSRQI-GISTLSSNI 552
Query: 354 T 356
+
Sbjct: 553 S 553
>SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 473
Score = 26.6 bits (56), Expect = 1.7
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +3
Query: 129 QNYVREPFKVWSELGRPGVGAVNFFTGMGGFLQALIFGYAGLSIHLDRLEFNRPQLPPEA 308
Q + P + W++L G A +GG ++ I G I L+ +P+LP
Sbjct: 282 QMQIGGPEEDWNDL-EEGDAASLLDGSVGGDPESDILLNEGNDIEATSLQDTKPELPDHF 340
Query: 309 TNFKIRGI-KYLGASLTLEVQIKTTTLKVASVNNDWPLTMD 428
T + G+ K++G V + L +++ PL +D
Sbjct: 341 TKVSVNGLHKFMGFDDAKNVDVDKDEL--SALAGTVPLVVD 379
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1428
Score = 25.8 bits (54), Expect = 2.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 174 RPGVGAVNFFTGMGGFLQALIFGYAGLSIHLDRLE 278
+P +G + F +GMG AL+ YAG+ L + E
Sbjct: 1017 KPIIGGIEFSSGMGLLHTALLGVYAGVPTLLIKQE 1051
>SPAC27D7.06 |||electron transfer flavoprotein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 2.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 353 QTGSQILYTSNFKIGCFRRQLGSV 282
+T S+ L +SNFKI C RR SV
Sbjct: 7 RTFSRALSSSNFKINCGRRHWFSV 30
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 3.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 247 AYPKIRACRKPPIPVKK 197
A+P ++CR PPIP ++
Sbjct: 618 AFPVTKSCRPPPIPPRE 634
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 24.6 bits (51), Expect = 6.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 318 KIRGIKYLGASLTLEVQIKTTTLKVASVNNDWPLTMDD 431
K RG + L L+++I TTT K + N +DD
Sbjct: 531 KSRGYQILLPESELDLKINTTTFKTIANNKSVDAFLDD 568
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 24.2 bits (50), Expect = 8.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 277 SKRSKCMLRPAYPKIRACRKPPIPVKKF-TAPTPGRP 170
S+ SK +L P+ R+PP+P + P PG P
Sbjct: 87 SEASKPLLNELVPEEPLPREPPLPNEPVPEEPLPGEP 123
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 24.2 bits (50), Expect = 8.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 295 SWGRLNSKRSKCMLRPAY 242
+WG LNS + K L P+Y
Sbjct: 230 AWGSLNSSKPKHALPPSY 247
>SPAC1250.07 |sfc7||TFIIIC subunit Sfc7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 120
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -2
Query: 262 CMLRPAYPKIRACRKPPIPVKKFTAPTPGRPSSL 161
C R +IR K P P +PT G P ++
Sbjct: 84 CKRRLMLEQIRLVPKNPSPSSSIHSPTQGEPENI 117
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 114 FNESYQNYVREPFKVWSE 167
F S +NYV PFK W E
Sbjct: 323 FCYSSRNYVSRPFKQWLE 340
>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 24.2 bits (50), Expect = 8.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 53 LEYALYRLLTVRRQFKSSSNI*RE 124
+EYAL ++ R F +SSNI RE
Sbjct: 248 VEYALKKIPLRLRSFSTSSNIFRE 271
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 24.2 bits (50), Expect = 8.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 8 SYYESVTREGWSSYDLEYALYRLLTVRRQFKSSSNI*RELPKLR 139
+Y++++ EG SS + +A+Y +L + F SN E+ LR
Sbjct: 834 NYFQALKTEGTSSVKIRHAVYLVLQI---FGHGSNRREEVLLLR 874
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,852,565
Number of Sequences: 5004
Number of extensions: 36209
Number of successful extensions: 116
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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