Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B21
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   3.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   3.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   6.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +3

Query: 117 SPSAPVCVKAALSTVRVI 170
           SP++ VC+ AAL  ++++
Sbjct: 623 SPASQVCIAAALIALQIV 640


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 60  PIQYGRFLSRSSRYSLCWKSPSAPVCVKAALSTVRVINLIPSIHNR 197
           PI++GR  SRS   +   +  S PV  +A +    V+  +  +H R
Sbjct: 83  PIRHGRRQSRSMDLNAHREQMSWPVKKEAVVEGDLVLGGLMMVHER 128


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +3

Query: 117 SPSAPVCVKAALSTVRVI 170
           SP++ VC+ AAL  ++++
Sbjct: 713 SPASQVCIAAALIALQIV 730


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 164 RYKFNSINTQSPWNNEENHI 223
           RYK    N    W ++E HI
Sbjct: 178 RYKEEESNENYNWEHKETHI 197


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 366 SHVAGELQAYANLYLKRSYEYLLSASYFNNYKIHRAGFS 482
           S +   L++++N+Y  R      +  Y ++ K+H   +S
Sbjct: 30  SMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKYS 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,061
Number of Sequences: 438
Number of extensions: 2802
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)