Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B19
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 30 0.63
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 29 1.5
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 28 1.9
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 1.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 2.5
U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical pr... 28 2.5
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 27 4.5
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 27 4.5
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 27 5.9
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 27 5.9
Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 26 7.8
AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear recep... 26 7.8
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.9 bits (64), Expect = 0.63
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 209 SPAPYPGPVEHKVLPAEPHNGHGPYGPNSYKYSETTYSTHNTTQRFPGSPSPSP 370
SP+ P P P+ G P+S Y ++T ST ++ PS SP
Sbjct: 206 SPSANPITTTIPYEPPNPYGGQTQVSPSSNSYPDSTVSTTSSNTESYEQPSTSP 259
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 209 SPAPYPGPVEHKVLPAEPHNGHGPYGPNSYKYSETTYSTHNTTQRFPGSPSPSPV 373
+P PYP P +G PY P+S Y +N P S +P P+
Sbjct: 167 TPTPYPSSQPTMPTPYPTGSGAAPYPPSSTPYPSAGAMGYNPYMNVPQS-TPYPM 220
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = -3
Query: 288 GP*GPCPLCGSAGNTLCSTGPGYGAGLRXXXXXXXXXLYSRWVLQCEQCWQTPPGGAGAT 109
GP GP G G PG G G+ R QC+QC Q PPG G
Sbjct: 144 GPPGPSGHPGKPGRP---GRPG-GHGMPGMPGLGASPCQPRTQSQCQQCPQGPPGPPGLN 199
Query: 108 GR 103
G+
Sbjct: 200 GQ 201
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Frame = +2
Query: 209 SPAPYPGPVEHK------VLPAEPHNGHGPYGPNSYKYSETTYSTHNTTQ--RFPGSPSP 364
S P PGPV+ V P+E H GP P SE + ++ + G PSP
Sbjct: 119 SGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSP 178
Query: 365 SPV 373
PV
Sbjct: 179 GPV 181
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 212 PAPYPGPVEHKVLPAEPHNGHGPYGPNSYK-YSETTYSTHNTTQRFPGSPSPSPVP 376
P PYP H+ PA PH+ P+ P +Y Y H G SP P
Sbjct: 70 PPPYPYQHPHQPPPAHPHHLQHPH-PYAYPGYPVPGQEGHQVPAPQHGDHEASPPP 124
>U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical
protein C06E7.4 protein.
Length = 500
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 215 APYPGPVEHKVLP---AEPHNGHGPYGPNSYKYSETTYSTHNTTQRFPGSP 358
+PYP + + P AEP+ H P+ P S + + N + G P
Sbjct: 27 SPYPEAKQRPIAPGAFAEPYMHHNPHHPQSKAQMRRSMISLNADSGYMGGP 77
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 116 PAPPGGVCQHCSHCNTHREYXXXXXXXXXXXSPAPYPGPVEHKVLPAE 259
PA G H H ++H + +P P P P+E PAE
Sbjct: 174 PAHTGHGHSHGGHGHSHGGHGHSHGHPAPTPAPTPAPKPIEEAPKPAE 221
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 116 PAPPGGVCQHCSHCNTHREYXXXXXXXXXXXSPAPYPGPVEHKVLPAE 259
PA G H H ++H + +P P P P+E PAE
Sbjct: 174 PAHTGHGHSHGGHGHSHGGHGHSHGHPAPTPAPTPAPKPIEEAPKPAE 221
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 281 YGPNSYKYSETTYSTHNTTQRFPGSPSPSPV 373
Y P ++K +E+T S TT++ P S SPV
Sbjct: 369 YSP-TFKSTESTTSVTQTTEKGPDSDDTSPV 398
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +2
Query: 212 PAPYPGPVEHKVLPAEPHNGHGPYG----PNSYKYSETTYSTH 328
P P PG ++ P + H + P+ PNS+ S+ +YS H
Sbjct: 556 PTPSPGNLQQFGEPLQRHGSY-PHSHDMRPNSHSQSQHSYSNH 597
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +2
Query: 212 PAPYPGPVEHKVLPAEPHNGHGPYG----PNSYKYSETTYSTH 328
P P PG ++ P + H + P+ PNS+ S+ +YS H
Sbjct: 542 PTPSPGNLQQFGEPLQRHGSY-PHSHDMRPNSHSQSQHSYSNH 583
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 245 VLPAEPHNGHGPYGPNSYKYSETTYSTH 328
V P EPH GP G + +E T+ H
Sbjct: 221 VPPEEPHGTSGPSGTTAAPTAEVTHEDH 248
>Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical
protein T23H4.2 protein.
Length = 373
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -2
Query: 250 QHLVLDRSWVRSRAAIPHVSGGDSSVLAMGVTMRAVLANTTWRSWCHRQELTV 92
Q LVL W +S ++ D + L G ++ +RS C E T+
Sbjct: 151 QQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTI 203
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 212 PAPYP-GPVEHKVLPAEPHNGHGPYGPNSYKYSETTYSTHNTTQRFPGSPSPSPVP 376
P YP GP + + PH YG + Y N Q++ + P+PVP
Sbjct: 267 PVQYPSGPSQ---MAGHPHMQQMQYGHMMRAPPVSVYGQMNNAQQYAVTAHPNPVP 319
>Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical
protein R53.3b protein.
Length = 322
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 PHNGHGPYG-PNSYKYSETTYSTHNTTQRFPGSPSPSP 370
PHN H NS S TT + H+ PG+ P P
Sbjct: 283 PHNHHRQRSLHNSTSTSTTTTTVHHPLLHLPGTSVPVP 320
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 PHNGHGPYG-PNSYKYSETTYSTHNTTQRFPGSPSPSP 370
PHN H NS S TT + H+ PG+ P P
Sbjct: 504 PHNHHRQRSLHNSTSTSTTTTTVHHPLLHLPGTSVPVP 541
>AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear receptor
NHR-69 protein.
Length = 373
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -2
Query: 250 QHLVLDRSWVRSRAAIPHVSGGDSSVLAMGVTMRAVLANTTWRSWCHRQELTV 92
Q LVL W +S ++ D + L G ++ +RS C E T+
Sbjct: 151 QQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTI 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,773,006
Number of Sequences: 27780
Number of extensions: 207628
Number of successful extensions: 743
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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