Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B19
         (377 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   4.8  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   6.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   8.4  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 211 PGSVPRTCRAQGVASRAAQWTRPLWSKLIQVQR 309
           PG VP+   +     R + + +   SK+ Q++R
Sbjct: 41  PGCVPKPIPSYACRGRCSSYLQVSGSKIWQMER 73


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 273 CPLCGSAGN 247
           CP+CG+ G+
Sbjct: 75  CPICGACGD 83


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 302 YSETTYSTHNTTQRFPGSPSPSPVP 376
           ++++  +  +T+  +PG  S SP P
Sbjct: 69  FNDSAAAITSTSPSYPGGGSSSPSP 93


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 232 CRAQGVASRAAQWTRPLWSK 291
           C+AQGV +    W +   SK
Sbjct: 731 CQAQGVPTPTIVWKKATGSK 750


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 232 CRAQGVASRAAQWTRPLWSK 291
           C+AQGV +    W +   SK
Sbjct: 727 CQAQGVPTPTIVWKKATGSK 746


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = +2

Query: 278  PYGPNSYKYSETTYSTHNTTQRFPGSPSPSPVP 376
            P   + Y   ++ YST   T      P P P P
Sbjct: 1329 PLSEHIYSSIDSDYSTLERTAWRQQQPPPPPPP 1361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,085
Number of Sequences: 438
Number of extensions: 2952
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)