Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B18
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   3.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   3.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   3.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   3.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 364  TRERAASSIVIFSFADVSNQPANPFSRQYSSILAGEFTTPSFCWSHRDIP 215
            T+  AAS  ++      +N      +  Y+S   G  TTP  C + +D+P
Sbjct: 1154 TKITAASETILHGLKKYTNYSMEVLA--YTSGGDGVRTTPIHCQTEQDVP 1201


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 186 TRILSYVCNYGISRCDQQKEGVVN 257
           +++   + NY   + DQ  EGV N
Sbjct: 598 SQLFVMISNYDDDKIDQSTEGVCN 621


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 282 CREKGFAGWFETSAKENITIEEAARSLVNKILLND 386
           CR  G A      + +N+ +  A+ S   K+L  D
Sbjct: 180 CRAVGNASTALAESFQNVLVPTASNSKSTKVLFKD 214


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 282 CREKGFAGWFETSAKENITIEEAARSLVNKILLND 386
           CR  G A      + +N+ +  A+ S   K+L  D
Sbjct: 180 CRAVGNASTALAESFQNVLVPTASNSKSTKVLFKD 214


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 282 CREKGFAGWFETSAKENITIEEAARSLVNKILLND 386
           CR  G A      + +N+ +  A+ S   K+L  D
Sbjct: 180 CRAVGNASTALAESFQNVLVPTASNSKSTKVLFKD 214


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
          protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 42 ESICTRYW*SVN 77
          E+ C RYW  VN
Sbjct: 39 ETYCDRYWECVN 50



 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 42  ESICTRYW 65
           E+ CTRYW
Sbjct: 109 ETSCTRYW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,107
Number of Sequences: 336
Number of extensions: 1823
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)