Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B18
(439 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 69 3e-13
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 59 3e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 58 4e-10
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 57 1e-09
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 54 1e-08
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 50 1e-07
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 50 2e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 48 6e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 43 2e-05
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 41 7e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 36 0.002
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 30 0.18
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 29 0.31
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 29 0.41
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 28 0.55
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 1.3
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 27 1.7
SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein Rad4|Schizosac... 27 1.7
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 26 2.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 2.2
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 26 2.9
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 25 3.9
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 3.9
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 25 3.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.1
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 25 5.1
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 25 5.1
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 25 5.1
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 25 6.7
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 25 6.7
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.7
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 24 8.9
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 8.9
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 24 8.9
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 68.9 bits (161), Expect = 3e-13
Identities = 30/63 (47%), Positives = 47/63 (74%)
Frame = +2
Query: 38 RREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLW 217
+++HL K++++GE G GKTSI+ +YV++ FS+ Y+ATIG DF K + D + ++ LQLW
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD-DKVVTLQLW 62
Query: 218 DIA 226
D A
Sbjct: 63 DTA 65
Score = 35.1 bits (77), Expect = 0.005
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 222 SRCDQQKEGVVNSPAKMDEYCREKGFAGWFETSAKENITIEEAARSLVNKILLN 383
++ D +++ + S +K +C+ +G +FETSAKE I ++EA ++ L N
Sbjct: 125 NKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN 178
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 59.3 bits (137), Expect = 3e-10
Identities = 28/66 (42%), Positives = 47/66 (71%)
Frame = +2
Query: 29 SSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRL 208
S+++R L K++++G+ G GKT ++ ++V+Q FS+ Y+ATIG DF K + D + ++ L
Sbjct: 2 SAQKRVFL-KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVD-DKLVTL 59
Query: 209 QLWDIA 226
QLWD A
Sbjct: 60 QLWDTA 65
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 58.4 bits (135), Expect = 4e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +2
Query: 53 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 226
+K++ +GE GKTS+I R+++ F Y+ATIG+DF K + + T +RLQLWD A
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTA 68
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 56.8 bits (131), Expect = 1e-09
Identities = 22/61 (36%), Positives = 42/61 (68%)
Frame = +2
Query: 44 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 223
++L+K+L+IG+ G GK+ ++ R+ +++ Y +TIGVDF ++ + T ++LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKT-VKLQIWDT 64
Query: 224 A 226
A
Sbjct: 65 A 65
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 54.0 bits (124), Expect = 1e-08
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +2
Query: 29 SSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRL 208
S++ ++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF ++ + D I+L
Sbjct: 2 STKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKR-IKL 60
Query: 209 QLWDIA 226
Q+WD A
Sbjct: 61 QIWDTA 66
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 50.4 bits (115), Expect = 1e-07
Identities = 20/57 (35%), Positives = 36/57 (63%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 226
K++++G+ GK+S++ R+V F + +TIG F + L D NT ++L++WD A
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTA 72
Score = 28.3 bits (60), Expect = 0.55
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 222 SRCDQQKEGVVNSPAKMDEYCREKGFAGWFETSAKENITIEEAARSLVNKILLNDKLLQS 401
++ D +E A + Y E +FETSAK + E ++ K+ L DKL Q+
Sbjct: 128 NKLDLAQERRAVEKADAEAYAAEANLL-FFETSAKTAENVNELFTAIAKKLPLEDKLNQA 186
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 50.0 bits (114), Expect = 2e-07
Identities = 22/61 (36%), Positives = 41/61 (67%)
Frame = +2
Query: 44 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 223
++L+K ++IG+ G GK++++ R+ F+ ++TIGV+FA + + D N I+ Q+WD
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLD-NKKIKAQIWDT 66
Query: 224 A 226
A
Sbjct: 67 A 67
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 48.0 bits (109), Expect = 6e-07
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = +2
Query: 35 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLN---WDANTIIR 205
E ++L KI++ G GTGK+ +++R+V + T+G+DFA ++++ + I+
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 206 LQLWDIA 226
LQ+WD A
Sbjct: 64 LQIWDTA 70
Score = 29.5 bits (63), Expect = 0.24
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 222 SRCDQQKEGVVNSPAKMDEYCREKGFAGWFETSAKENITIEEAARSLVNKILLNDKL--L 395
S+ D Q + V S + E+C EK + ETS+ +EE S+V+ I+ +L +
Sbjct: 126 SKSDLQNQRQV-STEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIELGEI 184
Query: 396 QSNDNRDGEKFG 431
D G ++G
Sbjct: 185 DPQDQSLGIQYG 196
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 43.2 bits (97), Expect = 2e-05
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDAN-TIIRLQLWDIAV 229
+K++++G+ GTGKT+ +KR++ F + Y AT+GV+ + L++ N I +WD A
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE--VHPLHFHTNFGEICFNVWDTAG 67
Query: 230 RPAKGG 247
+ GG
Sbjct: 68 QEKLGG 73
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 41.1 bits (92), Expect = 7e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 26 ASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIR 205
A + + K+ +IG+ GKTS++ YV F + T+GV+F K ++ NT I
Sbjct: 2 ADARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTIS-IRNTEIT 60
Query: 206 LQLWDI 223
+WD+
Sbjct: 61 FSIWDL 66
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 36.3 bits (80), Expect = 0.002
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 29 SSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRL 208
S + E K++V+G+ G GKT ++ + F + Y T+ ++ + + +I L
Sbjct: 7 SGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIEL 66
Query: 209 QLWDIA 226
LWD A
Sbjct: 67 ALWDTA 72
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 29.9 bits (64), Expect = 0.18
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 226
K++V+G+ GKTS++ + +F Y T+ ++ + D + ++L LWD A
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKS-VQLALWDTA 64
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 29.1 bits (62), Expect = 0.31
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 53 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 151
YK++V+G+ G GK+++ + + F Y TI
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI 41
Score = 28.3 bits (60), Expect = 0.55
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 222 SRCDQQKEGVVNSPAKMDEYCREKGFAGWFETSAKENITIEEAARSLVNKI 374
++CD + E VV S A+ ++ + + ETSAK + +EEA SLV I
Sbjct: 121 NKCDLEAERVV-SRAEGEQLAKSMHCL-YVETSAKLRLNVEEAFYSLVRTI 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 28.7 bits (61), Expect = 0.41
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKV 175
+I V+G GK+S+ +YV F + Y TI F+ +
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNI 47
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 28.3 bits (60), Expect = 0.55
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 2 NSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQ 121
NS G + ++ S R ++ +I+ + ELG G ++ + +HQ
Sbjct: 301 NSEGVNFSSGSSFRINMSEIIKLEELGKGNYGVVYKALHQ 340
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 27.1 bits (57), Expect = 1.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWD 187
K +V+G+ GKT ++ Y F Y T+ ++A+ V+ D
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGD 48
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 26.6 bits (56), Expect = 1.7
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 59 ILVIGELGTGKTSIIKRYVHQFFSQHYRATI-GVDFALKVLNWDANTIIR 205
I+V+G G+GKT+ +++ S++ I +D A++ L ++AN IR
Sbjct: 11 IIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIR 60
>SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein
Rad4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 648
Score = 26.6 bits (56), Expect = 1.7
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = -1
Query: 292 FSRQYSSILAGEFTTPSFCWSHRDIP*LQTYDSIRVPV 179
F++ + ++AG+F TP + ++ + P ++ S +PV
Sbjct: 40 FTKDVTHLIAGDFDTPKYKFAAKSRPDIKIMSSEWIPV 77
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 2.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 240 KEGVVNSPAKMDEYCREKGFAGWFETSAKENITIEEAARSL-VNKIL-LNDKLLQSNDNR 413
+EG +D+ + ++ N+TIEE RS VN+ L LND + N +
Sbjct: 396 REGATQFTLILDDPLSQSYLQNYYAPDPDPNMTIEEYERSFQVNEELGLND-MKTENYEK 454
Query: 414 DGEK 425
DG K
Sbjct: 455 DGGK 458
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 35 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 154
E +E+ ILV GE G GKT KR + + T+G
Sbjct: 159 ENKEN-QSILVTGESGAGKTENTKRIIQYLAAIASSTTVG 197
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 25.8 bits (54), Expect = 2.9
Identities = 9/27 (33%), Positives = 21/27 (77%)
Frame = +2
Query: 29 SSERREHLYKILVIGELGTGKTSIIKR 109
+S++ + +YK+L++G +GK++I K+
Sbjct: 27 ASKKDKKIYKVLLLGASDSGKSTISKQ 53
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.4 bits (53), Expect = 3.9
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = -1
Query: 367 LTRERAASSIVIFSFADVSNQPANPFSRQYSSILAGEFTTPSFCWSHRDIP*LQTYDSIR 188
LTRE+ ++ D P+N YS + FT PS C S IP + +S
Sbjct: 351 LTREKHLIALSNNPKGDEFLSPSNLDEMVYSKEVGLSFTQPSVCIS---IPAVGMRESEE 407
Query: 187 VPVQHFQCK 161
+ F+CK
Sbjct: 408 LRELEFKCK 416
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.4 bits (53), Expect = 3.9
Identities = 7/21 (33%), Positives = 17/21 (80%)
Frame = +2
Query: 59 ILVIGELGTGKTSIIKRYVHQ 121
+L++ E G+GKT+ + +++H+
Sbjct: 437 LLIVAETGSGKTTQLPQFLHE 457
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 29 SSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYR 142
SS R H+ L G GTGKTS I + + +YR
Sbjct: 52 SSNRVPHM---LFYGPPGTGKTSTILACARKIYGPNYR 86
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 59 ILVIGELGTGKTSIIK 106
+L++GE GTGKT+ I+
Sbjct: 470 LLLVGETGTGKTTTIQ 485
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.0 bits (52), Expect = 5.1
Identities = 7/21 (33%), Positives = 18/21 (85%)
Frame = +2
Query: 59 ILVIGELGTGKTSIIKRYVHQ 121
++V+GE G+GKT+ + +++++
Sbjct: 511 LIVVGETGSGKTTQLAQFLYE 531
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 25.0 bits (52), Expect = 5.1
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 226
K++++G+ GKT ++ + F + Y T+ ++ V D I L LWD A
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRH-IELALWDTA 62
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 25.0 bits (52), Expect = 5.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQ 121
KIL+ G+L GK+++ VH+
Sbjct: 156 KILITGDLNAGKSTLCNALVHK 177
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 24.6 bits (51), Expect = 6.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 56 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 226
K++++G+ GKT ++ + F + Y T+ ++ V D + L LWD A
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRH-VELALWDTA 62
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 24.6 bits (51), Expect = 6.7
Identities = 7/23 (30%), Positives = 18/23 (78%)
Frame = +2
Query: 53 YKILVIGELGTGKTSIIKRYVHQ 121
+ +LV+GE G+GK++++ +++
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNR 118
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.6 bits (51), Expect = 6.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 35 ERREHLYKILVIGELGTGKTSIIKRYVHQFFS 130
ERR + ILV GE G GKT K+ + S
Sbjct: 171 ERRIN-QSILVTGESGAGKTETTKKVIQYLTS 201
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 24.2 bits (50), Expect = 8.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 5 SSGSHATASSERREHLYKILVIGELGTGKTSIIKR 109
SSG +S + K+L++G +GKT+I+K+
Sbjct: 59 SSGVRVKGNSTSGGNDIKVLLLGAGDSGKTTIMKQ 93
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/21 (38%), Positives = 18/21 (85%)
Frame = +2
Query: 59 ILVIGELGTGKTSIIKRYVHQ 121
I+V+GE G+GK++ I +++++
Sbjct: 115 IVVVGETGSGKSTQIPQFLNE 135
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 303 GWFETSAKENITIEEAARSLVNKILLNDKLLQSNDN 410
G ++T + I +E L+N I LN+ +++ DN
Sbjct: 305 GTWDTGVESFIPMEYTGTHLINGIPLNESCVRNFDN 340
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,716,292
Number of Sequences: 5004
Number of extensions: 33704
Number of successful extensions: 157
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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