Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B12
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.18
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.41
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.2
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.6
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 3.8
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.0
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 5.0
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.0
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.6 bits (56), Expect = 0.18
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 298 TSFAKELLGDVLLFIDIIVAIIYLSLHC*IEIIFIKPRHK*LNRWFNTYF 149
TS A LLG LLF I+V + C + + F P ++ W F
Sbjct: 305 TSLAIPLLGKYLLFTMILVTLSIWITVCVLNVHFRSPSTHNMSPWVRQVF 354
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.4 bits (53), Expect = 0.41
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 301 STSFAKELLGDVLLFIDIIVAIIYLSLHC*IEIIFIKPRHK*LNRWFNTYF 149
STS A LLG LLF I+V + + + + + KP + W F
Sbjct: 290 STSLALPLLGKYLLFTMILVGLSVVITIVILNVHYRKPSTHKMAPWVRKIF 340
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 1.2
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -1
Query: 298 TSFAKELLGDVLLFIDIIVAIIYLSLHC*IEIIFIKPRHK*LNRWFNTYF 149
TS LLG LLF ++V + + + + F P + RW F
Sbjct: 292 TSLTVPLLGKYLLFTMVLVTLSVVVTIAVLNVNFRSPVTHRMARWVRVVF 341
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.4 bits (48), Expect = 1.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 197 YKATSQIAQSLV*HIFLFKKYSNKYCWAQKTHESLIATKKL 75
Y S V I + Y YC+AQK +S+ A KL
Sbjct: 192 YAVVSSSISFYVPCIVMLGIYCRLYCYAQKHVKSIRAVTKL 232
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 239 HNLFVSALLNRDHFYKA 189
H++ + +LLN H Y+A
Sbjct: 462 HSIVLGSLLNPSHMYRA 478
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 77 ISLLRLNSHVFFVPSNIYLN 136
ISL+ + + F+P NIY N
Sbjct: 405 ISLVYIIMLIIFIPRNIYEN 424
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 5.0
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -1
Query: 298 TSFAKELLGDVLLFIDIIVAIIYLSLHC*IEIIFIKPRHK*LNRWFNTYF 149
TS LLG L+F I+V+I + + F P+ + W F
Sbjct: 300 TSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVF 349
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 5.0
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -1
Query: 298 TSFAKELLGDVLLFIDIIVAIIYLSLHC*IEIIFIKPRHK*LNRWFNTYF 149
TS LLG L+F I+V+I + + F P+ + W F
Sbjct: 300 TSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVF 349
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -2
Query: 231 ICLCTVESRSFL*SHVTNSSIVGLTHIFVQKIFK 130
I C ++ SFL S + N+ ++ ++ ++ K K
Sbjct: 664 ILKCNIQDMSFLFSQLYNALLILISTVYAVKTRK 697
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -2
Query: 231 ICLCTVESRSFL*SHVTNSSIVGLTHIFVQKIFK 130
I C ++ SFL S + N+ ++ ++ ++ K K
Sbjct: 754 ILKCNIQDMSFLFSQLYNALLILISTVYAVKTRK 787
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,833
Number of Sequences: 438
Number of extensions: 4121
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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