Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B09
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   0.72 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.9  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 24.2 bits (50), Expect = 0.72
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 234 VRRQPASHSKCSRGTKSLPS 293
           V+ +P  HS C+ G+  LP+
Sbjct: 28  VKSEPQLHSPCATGSNGLPA 47


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 319 SAARPPIRDEGSDFVPREHLEW 254
           S ++PP R   +DF P+   +W
Sbjct: 256 SVSQPPNRKPRTDFKPQVLPQW 277


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 437 PRVSAPTGIRMGEP 396
           PR+S+P+  + G P
Sbjct: 70  PRISSPSSTKSGSP 83


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 74 APNPTYCTQHFSIISWSYVRN 12
          +P P+YC   ++   + Y++N
Sbjct: 28 SPPPSYCDPWYNPYYYQYLQN 48


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 275 YKIAPLVSYWRSRSTWVKI 331
           + +  L  +W SR +W K+
Sbjct: 143 FMLIALGEHWLSRYSWAKV 161


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 275 YKIAPLVSYWRSRSTWVKI 331
           + +  L  +W SR +W K+
Sbjct: 143 FMLIALGEHWLSRYSWAKV 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,872
Number of Sequences: 336
Number of extensions: 3106
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)