Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B09
(528 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 130 1e-31
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 44 1e-05
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 39 4e-04
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 0.75
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 1.3
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 27 2.3
SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|c... 26 3.0
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 26 4.0
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 26 4.0
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 4.0
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 25 7.0
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 25 7.0
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 25 9.2
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 130 bits (314), Expect = 1e-31
Identities = 67/89 (75%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = +1
Query: 241 DNLPPILNALEVQ-NRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDSGSPIRIP 417
D+LP ILNALEV+ + RLVLEVAQH+GENTVRTIAMDGTEGLVRG V D+GSPI IP
Sbjct: 73 DSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIP 132
Query: 418 VGAETLGRIINVIGEPIDERGPIPTDKTS 504
VG TLGRI+NVIGEP+DERGPI K S
Sbjct: 133 VGPGTLGRIMNVIGEPVDERGPIKAVKYS 161
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 44.0 bits (99), Expect = 1e-05
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 307 VAQHLGENTVRTIAMDGTEGLVR-GQPVHDSGSPIRIPVGAETLGRIINVIGEPIDERGP 483
+A +L +TV + G + LVR G+ V + + +PVG LGR+++ +G PID +GP
Sbjct: 90 MALNLEADTVGCVLF-GNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGP 148
Query: 484 IPT 492
I T
Sbjct: 149 IKT 151
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 39.1 bits (87), Expect = 4e-04
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 298 VLEVAQHLGENTVRTIAMDGTEGL-VRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 474
VLEVA H V +GT G+ VR + +G +RIPV + LGR+ N G PID
Sbjct: 63 VLEVAGHKAIVQV----FEGTSGVDVRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPID- 117
Query: 475 RGP 483
+GP
Sbjct: 118 KGP 120
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 28.3 bits (60), Expect = 0.75
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 482 GPRSSIGSPMTLMIRPRVSA-PTGIRMGEPESCTGCPRTKPSVPSM 348
G R++ G+P + R+++ PT I PES K S PS+
Sbjct: 154 GKRTAPGNPWAIRSAERLASNPTSIGTSSPESIDNNSNNKKSAPSL 199
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 266 LSRYKIAPLVSYWRSRSTWVKIRSEPLPWTVP 361
L+RY I+P +S S ++I S +PW P
Sbjct: 219 LNRYDISPAAFILKSGSPSLQIHSVEIPWVEP 250
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 358 TEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPIDE 474
T GL G PV +G P+ + +G I + I P+ +
Sbjct: 77 TSGLTVGDPVQRTGKPLSVELGPGLAETIYDGIQRPLKQ 115
>SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 113
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 339 NHCHGR-YRGFSARTTRT*LWFTHPYPRRSRDSGPYHQCH 455
NH + YR F+ R LW+ +PY + +G YH +
Sbjct: 75 NHSYSAFYRPFTKRENG--LWYANPYYMQHGPNGNYHHVY 112
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = -2
Query: 179 CSFCRIVPLVDGRHSCNLATFCKGFFRNCFSG*EAAPNPTYCTQHFSIIS 30
C + + + L+ G H T GF+ C +A YC + F +S
Sbjct: 101 CKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWRYCCEIFDYLS 150
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 133 AILPHSVKVFSATVLAAKKPLPTRLTAPNIF 41
A++ K+FSA V++A +P L A N+F
Sbjct: 1070 ALISGFFKIFSAAVVSATLLIPFALWAKNVF 1100
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 4.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 488 GIGPRSSIGSPMTLMIRPRVSAPTGIRMGEPESCTGCPRTKPSVPSMA 345
G G ++S+GS I R+ PT MG S G T P+ A
Sbjct: 487 GHGSQTSLGSIKRKSIMERMGRPTSPFMGSSFSNMGSRSTSPTKEGFA 534
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 7.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 283 RSPRLVLEVAQHLGENTVRTIAMD 354
R+P LVL+ A LGEN + D
Sbjct: 362 RNPSLVLDSANQLGENVAWPVQYD 385
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 7.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 334 VRTIAMDGTEGLVRGQPVHDSGSPIRIPVGAETLGRIINVIGEPID 471
++ + DG G+ + + D+ P P E LGR+I V PID
Sbjct: 1 MKAVIADGQNGV---EVISDAPKPT--PEKGEFLGRVIRVAFNPID 41
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 267 SRGTKSLPSSRIGGRAALG*KYGPNHCHGRYRGFSAR 377
S+ SL +IG R LG Y G +RGF R
Sbjct: 271 SKSAASLVKPKIGIRHVLGGLYKSEGLLGLFRGFGPR 307
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,285,650
Number of Sequences: 5004
Number of extensions: 47813
Number of successful extensions: 132
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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