Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B07
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.39 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.7  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   4.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.39
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -1

Query: 361 ITYWYEFHFVFQVHC---VC-GRFYFIHPVIICGYLPFFVRI 248
           I Y+Y    +F VH    VC   FY++H +  C ++ F + +
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279



 Score = 21.0 bits (42), Expect = 4.8
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +3

Query: 348 YQYVIK*YTFLFKIFFFCSYVI 413
           Y +V+  +  L   +F+C+++I
Sbjct: 134 YYFVVPLFFLLCIYYFYCAFII 155


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 325 VHCVCGRFYFIHPVIICGYLPFFV 254
           +H V   +Y +  V   GYLPF +
Sbjct: 280 LHLVVTPYYLLIEVCNAGYLPFIL 303



 Score = 22.2 bits (45), Expect = 2.1
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 65  VLKIVF-PVKPDVATDVKIHXXXXXXXXXXXXXXGMMESSREEMTN 199
           VLK++  P+ PD+   V+I               GM++ SR  +T+
Sbjct: 325 VLKLLTSPLLPDIKEQVEILAVQVSNKKIKFSSFGMLKISRSLLTS 370


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -1

Query: 355 YWYEFHFVFQVHCVCGRFYFIHPVIICGYLPF 260
           YW  FH  F  H V G    IH      Y PF
Sbjct: 666 YWL-FHCHFLFHIVIGMNLIIHVGTQLIYRPF 696



 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 220 LVVGFNVIGHFFPTTFHHPLSH 155
           +V+G N+I H      + P SH
Sbjct: 677 IVIGMNLIIHVGTQLIYRPFSH 698


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 248 DTDKERQISTNDNWMN 295
           D D++ QI T + W+N
Sbjct: 42  DVDEKNQILTTNAWLN 57


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 248 DTDKERQISTNDNWMN 295
           D D++ QI T + W+N
Sbjct: 42  DVDEKNQILTTNAWLN 57


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 248 DTDKERQISTNDNWMN 295
           D D++ QI T + W+N
Sbjct: 42  DVDEKNQILTTNAWLN 57


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 151 NFRGLCRGN 125
           +FRGLC GN
Sbjct: 411 DFRGLCTGN 419


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 303 KRPHTQW 323
           KRPH QW
Sbjct: 232 KRPHDQW 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,518
Number of Sequences: 336
Number of extensions: 1944
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)