Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B07
(415 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 2.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 2.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 2.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 2.4
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 22 3.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 4.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 4.2
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 5.5
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 7.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 9.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 9.6
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 9.6
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 382 NKKVYHLITYWYEFHFVFQVHCVCGRF 302
NKK+Y+ I Y + V CG F
Sbjct: 103 NKKLYYNINYIEQIPVPVPVPIYCGNF 129
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 382 NKKVYHLITYWYEFHFVFQVHCVCGRF 302
NKK+Y+ I Y + V CG F
Sbjct: 103 NKKLYYNINYIEQIPVPVPVPIYCGNF 129
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 382 NKKVYHLITYWYEFHFVFQVHCVCGRF 302
NKK+Y+ I Y + V CG F
Sbjct: 105 NKKLYYNINYIEQIPVPVPVPVYCGNF 131
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 382 NKKVYHLITYWYEFHFVFQVHCVCGRF 302
NKK+Y+ I Y + V CG F
Sbjct: 341 NKKLYYNINYIEQIPVPVPVPIYCGNF 367
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 21.8 bits (44), Expect = 3.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 2 LDVRTLPDCVNVNGS 46
+DV+ L +C+N N S
Sbjct: 110 IDVKMLSECINANKS 124
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 413 YDIRTKKEDFK*KSISLNNVLVRI 342
YD +T +DF K + N+L R+
Sbjct: 24 YDTKTADKDFLLKQKKVYNLLYRV 47
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 413 YDIRTKKEDFK*KSISLNNVLVRI 342
YD +T +DF K + N+L R+
Sbjct: 24 YDTKTADKDFLLKQKKVYNLLYRV 47
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 5.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 297 LFIQLSFVDICRSLSVSPLA 238
L + L+ D+C +L V P+A
Sbjct: 79 LLVSLAVSDLCVALLVMPMA 98
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 322 HCVCGRFY 299
H VCGRFY
Sbjct: 123 HEVCGRFY 130
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 379 KKVYHLITYWYEFHFVFQVHCVCGRF 302
KK+Y+ I Y + V CG F
Sbjct: 107 KKLYYNINYIEQIPIPVPVPIYCGNF 132
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.6
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +2
Query: 248 DTDKERQISTNDNWMNKV 301
D D++ QI T + W+ ++
Sbjct: 44 DVDEKNQILTTNCWVTQI 61
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 379 KKVYHLITYWYEFHFVFQVHCVCGRF 302
KK+Y+ I Y + V CG F
Sbjct: 324 KKLYYNINYIEQIPIPVPVPIYCGNF 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,502
Number of Sequences: 438
Number of extensions: 2237
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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