Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B04
         (397 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   2.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   3.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   3.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    20   7.7  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 288 TYPNKCSLECSRPLAPSLE 344
           T P K  ++  RPLAP+ E
Sbjct: 37  TQPTKTVIQSKRPLAPAPE 55


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 146 LPQPVPLVLREGQDAQR 196
           LP+P PLV ++G + +R
Sbjct: 236 LPKPTPLVPQQGFNMER 252


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = -2

Query: 318 NTPVNIY*GKCSRLCQRPGHI*RYRRKDRLPHTYPLSRFSNRCASCPSR 172
           N+PV+   G    L    G+          P  +PLS   + C+ C  R
Sbjct: 44  NSPVSFSMGGHGSLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSICGDR 92


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 263 PGLWHRREHLP 295
           P +WH   H+P
Sbjct: 47  PQMWHHHSHMP 57


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 263 PGLWHRREHLP 295
           P +WH   H+P
Sbjct: 47  PQMWHHHSHMP 57


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 115 KFLAHAHDDG 86
           KF++H H+DG
Sbjct: 230 KFMSHIHNDG 239


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 376 LTSWHSPR 353
           +T WHSPR
Sbjct: 68  VTHWHSPR 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,525
Number of Sequences: 336
Number of extensions: 1903
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)