Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B04
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 63 6e-11
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 52 1e-07
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 52 1e-07
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 38 0.003
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 28 2.1
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 28 2.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 2.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 2.8
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 27 6.4
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 27 6.4
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 6.4
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 6.4
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 6.4
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 6.4
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 6.4
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 26 8.5
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 63.3 bits (147), Expect = 6e-11
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +3
Query: 87 PSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAP 266
P C C +RPVCG+D TY+N C L C + +T+ DL GTC D C + P
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQ-RTNEDLLFFYNGTC--CDKKECEKVGTP 72
Query: 267 VSGTDGNTYPNKC---SLEC--SRPLAPSLEMIHRGEC 365
+ G T+ N C +C + + SL +H G C
Sbjct: 73 ICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRC 110
Score = 47.2 bits (107), Expect = 4e-06
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQC---LLYCERDKTHSD-LKIVKEGTCEEADPC--VCTFIYA 263
C + PVC S G T+ N C + C ++T D L I K C E C C Y+
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYS 877
Query: 264 PVSGTDGNTYPNKCSLECSRPLAPS-------LEMIHRGECQEVKVADI 389
PV ++G N+C L+ R L + L + GEC ++ DI
Sbjct: 878 PVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGECCRIENCDI 926
Score = 46.4 bits (105), Expect = 7e-06
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQCLLYCER----DKTHSDLKIVKEGTCEEADPCV--CTFIYA 263
C + +PVC S G + N C R K H + I E C + C CT
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQ-IHIATEENCISKEACQMPCTDDKH 595
Query: 264 PVSGTDGNTYPNKCSLECSRPLAPSLEMIHRGECQE 371
P+ +D +TY N C + L LE++ +G+C E
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 43.2 bits (97), Expect = 7e-05
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 93 SCACARNLRPVCGSDGKTYHNQCLLYCE-RDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 269
S C + P+CG++G T+ N C L E + +S +++ G C + + C ++PV
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN---CPSDFSPV 825
Query: 270 SGTDGNTYPNKCSLECSRPLA 332
+ G+T+ N C R +A
Sbjct: 826 CDSKGSTHQNICHFGVKRCIA 846
Score = 42.7 bits (96), Expect = 9e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 99 ACARNLRPVCGSDGKTYHNQCLL-----YCERDKTHSDLKIVK--EGTCEEADPCVCTFI 257
AC + PVC S+G+ N+C L E + T D K+VK +G C + C + +
Sbjct: 871 ACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGD-KLVKDYDGECCRIENCDIS-V 928
Query: 258 YAPVSGTDGNTYPNKCSLE 314
++PV T+G T+ N C ++
Sbjct: 929 FSPVCDTEGVTHANMCLMD 947
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 240 CVCTFIYAPVSGTDGNTYPNKCSLECSRPLAPSLEMIHRGECQEVK 377
C C + PV GTD TY N C L C + L + G C + K
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK 64
Score = 33.1 bits (72), Expect = 0.074
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 99 ACARNLRPVCGSDGKTYHNQCLLY---CERDKTHSD---LKIVKEGTCEEADPCVCTFIY 260
+C + +PVC S G+T+ + C + C DK H+ L + +G C P CT
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC---CPAGCTDEL 1128
Query: 261 APVSGTDGNTYPNKC 305
+ + N Y N C
Sbjct: 1129 SVICDQHENIYRNSC 1143
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 246 CTFIYAPVSGTDGNTYPNKCSL--ECSRPLAPSLEMIHRGECQEVKV-ADIQP 395
C Y P+ GT+G T+ N CSL E ++E+ + G C + +D P
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCPSDFSP 824
Score = 30.3 bits (65), Expect = 0.52
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQC---LLYCERDKTHS-DLKIVKEGTCEEADPCV--CTFI-Y 260
C + P+C + G+T+ N C C K+ L + G C D C CT +
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKD-CNHNCTNTEF 124
Query: 261 APVSGTDGNTYPNKCSLECSR 323
PV T+G+ Y N C + R
Sbjct: 125 DPVCDTNGSVYRNLCVFQMRR 145
Score = 29.1 bits (62), Expect = 1.2
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 123 VCGSDGKTYHNQCLLYCER----DKTHSDLKIVKEGTCEEADPCVCTFIYAPVSGTDGNT 290
VC S+G+T+ N C+ R + L IV G C C T PV + G T
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKT--GQPVCDSRGRT 1087
Query: 291 YPNKCSLECSR 323
+ + C S+
Sbjct: 1088 HDSLCHFHNSK 1098
Score = 26.6 bits (56), Expect = 6.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQC 161
C+R+++PVC T+ N C
Sbjct: 375 CSRDVKPVCDEANNTHQNLC 394
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 52.4 bits (120), Expect = 1e-07
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPC---VCTFIYAPV 269
C N VCG+DGKTY N+C L K D+ + K G C+EA PC C F + V
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 270 SGTDGNT---YPNKCSLECSRPLAPSLEMIHRGECQEVK 377
D PN+C + RP+ + EC+ K
Sbjct: 383 VKPDRTAECECPNRCE-DVMRPVCATNGETFDNECEMKK 420
Score = 45.2 bits (102), Expect = 2e-05
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGT-----------CEEADPCV- 245
C +RPVC ++G+T+ N+C + + +T S +K+ +GT C++ CV
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 456
Query: 246 -----------CTFIYAPVSGTDGNTYPNKCSLECSRPLA-PSLEMIHRGECQEVKV 380
CT + V G+DG TY N+C L+ + +A ++ + + C+ K+
Sbjct: 457 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKL 513
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 99 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVS 272
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 467 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 526
Query: 273 GTDGNTYPNKCSLECSRPLAPSLEM 347
G + KC +C PS EM
Sbjct: 527 G-ENEKAECKCPDDC-----PSYEM 545
Score = 32.7 bits (71), Expect = 0.098
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +3
Query: 93 SCACARNLRPVCGSDGKTYHNQC---LLYCERDKTHSDLKIVKE--GTCEEADPCVCTFI 257
+C + N P+CGSDG Y+NQC + C + L ++ G D C C +
Sbjct: 685 TCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHVLPLISHWIGESRVLDSCQCNRV 743
Query: 258 YAPVSGTDGNTYPNKCSLECSRPLAPSLEMIH 353
G+ G+T +C RP ++ H
Sbjct: 744 -----GSFGHTCDETGQCKC-RPGVAGIKCDH 769
Score = 31.1 bits (67), Expect = 0.30
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +3
Query: 117 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 251
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 549 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 606
Query: 252 F-------IYAPVSGTDGNTYPNKCSLE 314
+ + A + G +G YP+ C L+
Sbjct: 607 YNCPANPPLSARICGENGVLYPSLCHLQ 634
Score = 30.7 bits (66), Expect = 0.40
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 123 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 242
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 218
Score = 29.1 bits (62), Expect = 1.2
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 26/110 (23%)
Frame = +3
Query: 120 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPC------------------- 242
PVC S G Y + C L ++ +++ + G C DPC
Sbjct: 259 PVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRC---DPCHGHKCPNGQTCQLGVDRRP 315
Query: 243 ------VCTFIYAPVSGTDGNTYPNKCSLECSR-PLAPSLEMIHRGECQE 371
CT A V GTDG TY N+C L+ + + + RG C E
Sbjct: 316 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDE 365
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 123 VCGSDGKTYHNQCLL 167
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 52.4 bits (120), Expect = 1e-07
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEA-DPC---VCTFIYAPV 269
C N VCG+DGKTY N+C L K D+ + K G C+EA PC C F + V
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 270 SGTDGNT---YPNKCSLECSRPLAPSLEMIHRGECQEVK 377
D PN+C + RP+ + EC+ K
Sbjct: 391 VKPDRTAECECPNRCE-DVMRPVCATNGETFDNECEMKK 428
Score = 45.2 bits (102), Expect = 2e-05
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGT-----------CEEADPCV- 245
C +RPVC ++G+T+ N+C + + +T S +K+ +GT C++ CV
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 464
Query: 246 -----------CTFIYAPVSGTDGNTYPNKCSLECSRPLA-PSLEMIHRGECQEVKV 380
CT + V G+DG TY N+C L+ + +A ++ + + C+ K+
Sbjct: 465 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKL 521
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 99 ACARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE--EADPCVCTFIYAPVS 272
+C + VCGSDGKTY N+C L ++ + CE + C F A V
Sbjct: 475 SCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDFYSACVV 534
Query: 273 GTDGNTYPNKCSLECSRPLAPSLEM 347
G + KC +C PS EM
Sbjct: 535 G-ENEKAECKCPDDC-----PSYEM 553
Score = 33.1 bits (72), Expect = 0.074
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 123 VCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEE 230
VCGSDG TY N C L K D+ V G C++
Sbjct: 819 VCGSDGTTYSNLCELKMFACKHQIDVVPVSMGICDD 854
Score = 31.1 bits (67), Expect = 0.30
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +3
Query: 117 RPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK--EGTCEE-------------ADPCVCT 251
+ VCG+DG TY ++C + ++ H ++ EG C+E + CVC+
Sbjct: 557 KEVCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCS 614
Query: 252 F-------IYAPVSGTDGNTYPNKCSLE 314
+ + A + G +G YP+ C L+
Sbjct: 615 YNCPANPPLSARICGENGVLYPSLCHLQ 642
Score = 30.7 bits (66), Expect = 0.40
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 123 VCGSDGKTYHNQCLLY---CERDKTHSDLKIVKEGTCEEADPC 242
VCGSD +Y + C L C K L++ +G C++ +PC
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPC 226
Score = 29.1 bits (62), Expect = 1.2
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 26/110 (23%)
Frame = +3
Query: 120 PVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPC------------------- 242
PVC S G Y + C L ++ +++ + G C DPC
Sbjct: 267 PVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRC---DPCHGHKCPNGQTCQLGVDRRP 323
Query: 243 ------VCTFIYAPVSGTDGNTYPNKCSLECSR-PLAPSLEMIHRGECQE 371
CT A V GTDG TY N+C L+ + + + RG C E
Sbjct: 324 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDE 373
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 90 SSCACARNLRPVCGSDGK---TYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIY 260
S+C+C + PVC +G TY N+C+ C ++ DL ++ EG+C A C
Sbjct: 23 STCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQE-NKKDLVLLYEGSCCSAR--YCNMFE 79
Query: 261 APVSGTDGNTYPNKCSLE 314
PV ++G Y C E
Sbjct: 80 QPVC-SEGQMYQTVCEFE 96
Score = 34.3 bits (75), Expect = 0.032
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 102 CARNLRPVCGSDGKTYHNQCLLY---C-ERDKTHSDLKIVKEGTCEEADPCVCTFIYAPV 269
C PVC G+T+ N C C +++ + L++ G C E D C V
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE-DMCSAGQTSLTV 183
Query: 270 SGTDGNTYPNKCS 308
++GNT+ + CS
Sbjct: 184 CDSEGNTHTDICS 196
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +3
Query: 225 EEADPCVCTFIYAPVSGTDGN---TYPNKCSLECSRPLAPSLEMIHRGEC 365
E C C PV +G TY NKC +C++ L +++ G C
Sbjct: 20 EPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSC 69
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +3
Query: 105 ARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVSGTDG 284
AR++ CG GK + QC+L + + + + ++G CE+ C I G +
Sbjct: 89 ARSIVSDCGKHGKCVNGQCILNRCQGVSCDEGSMCRDGKCEKVLETFC--IGHADCGPNM 146
Query: 285 NTYPNKCSLECSRPL--APSLEMIHRGEC 365
NKC L+ PL E+ H G+C
Sbjct: 147 LCQQNKCQLKPQEPLCNCQPHEICHHGQC 175
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.9 bits (69), Expect = 0.17
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 90 SSCACAR-NLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVKEGTCE 227
S C+C +L PVC +DG Y + C C ++ +CE
Sbjct: 526 SQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 153 NQCLLYCERDKTHSDLKIVKEGTCEEADPCVCT 251
N +LY R K HS++ I G C++ PC+CT
Sbjct: 450 NLAVLYKIR-KEHSEIIIHNLGHCDKHLPCICT 481
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 108 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 230
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 380 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 424
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 108 RNLRPVCGSDGKTYHNQCLLYCER--DKT--HSDLKIVKEGTCEE 230
+ + P C ++G H+QC+ CER D T H+ + +G C E
Sbjct: 377 KEIGPGCDANGDRCHDQCVGGCERVNDATACHACKNVYHKGKCIE 421
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 2.8
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 IRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSLR 244
+R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 567 MRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNLP 620
Query: 245 L 247
L
Sbjct: 621 L 621
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 2.8
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 IRRNSAAVVMRVRKKLKTGLRIRRQDLPQPVPLVLREGQDAQRFE-NRERGYV*GSRSLR 244
+R +S+ +++RV+ K+ +RRQ PQP P + Q Q++E E YV SR+L
Sbjct: 789 MRGSSSPILVRVQLSSKSPDSVRRQVQPQPQP----QPQQQQQYEAYGEADYV--SRNLP 842
Query: 245 L 247
L
Sbjct: 843 L 843
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 264 GHI*RYRRKDRLPHTYPLSR--FSNRCASCPSR 172
G I R D P T+ +R +SNR + CPSR
Sbjct: 578 GRIIACERNDDCPSTHTCTRQLYSNRTSCCPSR 610
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 135 DGKTYHNQCL--LYCERDKTHSDLKIVKEG 218
DGK YHN CL C+ +SD V++G
Sbjct: 126 DGKYYHNNCLRCQMCDIPFEYSDKCYVRDG 155
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 135 DGKTYHNQCL--LYCERDKTHSDLKIVKEG 218
DGK YHN CL C+ +SD V++G
Sbjct: 126 DGKYYHNNCLRCQMCDIPFEYSDKCYVRDG 155
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 84 LPSSCACARNLRPVCGSDGKTYHNQCLLYCERDKTHSD-----LKIVKEGTCEEADPCV 245
+P C L GSD K +C + C+ H+D K +G+ E+ + CV
Sbjct: 1006 IPKRRQCDGTLDCRDGSDEKGCKKECAIVCDNSCVHADDLCDGKKKCNDGSDEDEEACV 1064
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 369 PGIRRD-VSSLETALTVENTPVNIY*GKCSRLCQRPGHI*RYRRKDRLPHTYPLSRFSNR 193
PG+ + ++ L V+NT + + GKC L Q + ++ + + T+ FSNR
Sbjct: 132 PGVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNR 191
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 369 PGIRRD-VSSLETALTVENTPVNIY*GKCSRLCQRPGHI*RYRRKDRLPHTYPLSRFSNR 193
PG+ + ++ L V+NT + + GKC L Q + ++ + + T+ FSNR
Sbjct: 160 PGVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNR 219
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 369 PGIRRD-VSSLETALTVENTPVNIY*GKCSRLCQRPGHI*RYRRKDRLPHTYPLSRFSNR 193
PG+ + ++ L V+NT + + GKC L Q + ++ + + T+ FSNR
Sbjct: 218 PGVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNR 277
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 369 PGIRRD-VSSLETALTVENTPVNIY*GKCSRLCQRPGHI*RYRRKDRLPHTYPLSRFSNR 193
PG+ + ++ L V+NT + + GKC L Q + ++ + + T+ FSNR
Sbjct: 219 PGVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNR 278
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 324 VENTPVNIY*GKCSRLCQRPGHI*RYRRKDRLPHTYPLSRFSNR 193
V+NT + + GKC L Q + ++ + + T+ FSNR
Sbjct: 5 VDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNR 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,141,369
Number of Sequences: 27780
Number of extensions: 193179
Number of successful extensions: 645
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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