Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B04
         (397 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   3e-04
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   2.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   3.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   3.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   3.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 35.1 bits (77), Expect = 3e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 102 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK 212
           C R  RPVC S+GK Y N C L+  R   HS   + K
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTK 144



 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 246 CTFIYAPVSGTDGNTYPNKCSL 311
           C   + PV  ++G  Y N C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 14/65 (21%), Positives = 24/65 (36%)
 Frame = +3

Query: 135 DGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVSGTDGNTYPNKCSLE 314
           DGK  H+       +  + S  +  +     + DP   + + A ++GT     P  C   
Sbjct: 432 DGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCLPP 491

Query: 315 CSRPL 329
              PL
Sbjct: 492 REAPL 496


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 299 IRVSVPVCARDRGIYEGTDARIGFLTRTLFHDFQIAV 189
           IRV V  C R  G+  G D  +G    T+ H  +I +
Sbjct: 113 IRVRVDACDRLWGVDTGVDDILG--NNTVIHQPRIII 147


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +3

Query: 246 CTFIYAPVSGTDGNTYPNKCSLECSR 323
           C   Y      DGN+Y N     CSR
Sbjct: 230 CHSRYEDSRHEDGNSYRNDGERSCSR 255


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -2

Query: 288 CSRLCQRPGHI*RY-RRKDRLPHTY 217
           C RLC R G + R+    + +P  Y
Sbjct: 247 CERLCNRLGRVKRFINWHEPIPEAY 271


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 228 PHTYPLSRFSNRCASCPSRNTR 163
           P  YPL RF N     P R+ R
Sbjct: 67  PSVYPLLRFENPETHHPIRHGR 88


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 372 LPGIRRDVSSLETALTVENTPVNIY*GKCSRLCQRPG 262
           +P   RD++ L+T    EN   N Y G    L Q  G
Sbjct: 446 VPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTG 482


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 379 TLTSWHSPRCIIS 341
           T  SWHSP   IS
Sbjct: 152 TEASWHSPEAHIS 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,636
Number of Sequences: 438
Number of extensions: 2451
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)