Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B03
         (237 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q228Q5 Cluster: Putative uncharacterized protein; n=1; ...    34   0.70 
UniRef50_Q82Z07 Cluster: Zinc-binding transcriptional regulator,...    31   3.8  
UniRef50_UPI000023F516 Cluster: predicted protein; n=1; Gibberel...    31   6.6  
UniRef50_Q99K70-2 Cluster: Isoform 2 of Q99K70 ; n=1; Mus muscul...    31   6.6  
UniRef50_A6DAF9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_Q228Q5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 912

 Score = 33.9 bits (74), Expect = 0.70
 Identities = 15/54 (27%), Positives = 33/54 (61%)
 Frame = -2

Query: 194 LVEMCYLHHRFVQTARS*NFWEMNPRSN*DHLDNSSFNLKHKFISRTYFRVKIE 33
           L ++ +L+H+F+Q  +  NF++   R+N D L +  + + + F++ TY  + +E
Sbjct: 626 LYQLIFLYHQFIQNQQQANFYKELSRANEDFLFSCKYRI-YDFLNLTYSIILLE 678


>UniRef50_Q82Z07 Cluster: Zinc-binding transcriptional regulator,
           Cro/CI family; n=3; Lactobacillales|Rep: Zinc-binding
           transcriptional regulator, Cro/CI family - Enterococcus
           faecalis (Streptococcus faecalis)
          Length = 379

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +3

Query: 108 LIATWVHFPKILATGRLNKTVMEIT--HLYKKTTNLVFF*WGLD 233
           ++AT+V+FPK+     + K++ EIT   + KK   L    WGLD
Sbjct: 107 VLATYVNFPKVCLPELIEKSIYEITEEEIVKKAEELRKI-WGLD 149


>UniRef50_UPI000023F516 Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 165

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 98  QDDPNCYVGSFPKNFSYGPFEQNGDGDNTSLQE-DHKP 208
           + + NC+V      F YG   +NGDG   +L + D+KP
Sbjct: 79  RQEGNCWVVEISDRFQYGQKNKNGDGRWVALHDKDNKP 116


>UniRef50_Q99K70-2 Cluster: Isoform 2 of Q99K70 ; n=1; Mus
           musculus|Rep: Isoform 2 of Q99K70 - Mus musculus (Mouse)
          Length = 182

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
 Frame = +2

Query: 125 SFPKNFSYGPFEQN-------------GDGDNTSLQEDHKPRILLMGLRR 235
           SFPK+F YG  E+              G G      +  KPRILLMGLRR
Sbjct: 21  SFPKDFGYGVEEEEEEAAAGGGGGAGAGGGCGPGGADSSKPRILLMGLRR 70


>UniRef50_A6DAF9 Cluster: Putative uncharacterized protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Putative
           uncharacterized protein - Caminibacter mediatlanticus
           TB-2
          Length = 1026

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 105 ILIATWVHFPKILATGRLNKTVMEITHLYKKTTNLVF 215
           I+  T + +  IL T R+N  + +I HLYKK    V+
Sbjct: 755 IIDPTPISWQFILPTNRVNDAIKKIQHLYKKEVKYVY 791


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,733,284
Number of Sequences: 1657284
Number of extensions: 3347404
Number of successful extensions: 6654
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6652
length of database: 575,637,011
effective HSP length: 57
effective length of database: 481,171,823
effective search space used: 10104608283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)