Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B03
         (237 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   5.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   9.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 16   YKYMLISILTLK*VLDINLCFKLNDELS 99
            +++   S +  K  LD +LC K  DE++
Sbjct: 1305 HRFGTFSQIITKTQLDFDLCSKPIDEMT 1332


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 16   YKYMLISILTLK*VLDINLCFKLNDELS 99
            +++   S +  K  LD +LC K  DE++
Sbjct: 1305 HRFGTFSQIITKTQLDFDLCSKPIDEMT 1332


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 13  YYKYMLISILTL 48
           YY+++LIS++ +
Sbjct: 180 YYEFLLISLINI 191


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 189 RDVLSPSPFCSNG 151
           RDV   + +C NG
Sbjct: 640 RDVYQDNVYCKNG 652


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,444
Number of Sequences: 336
Number of extensions: 926
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3428128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)