Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B03
         (237 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   4.7  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   6.2  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    19   8.3  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    19   8.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    19   8.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   8.3  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 231 LSPIRRIRGLWSSC 190
           L+ IRR RGL  SC
Sbjct: 108 LTQIRRDRGLHVSC 121


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 158 EQNGDGDNTSLQEDHK 205
           +QNG+  N + Q D+K
Sbjct: 454 KQNGNRQNDNRQNDNK 469



 Score = 19.0 bits (37), Expect = 8.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 158 EQNGDGDNTSLQEDHK 205
           +QNG+  N + Q D+K
Sbjct: 489 KQNGNRQNGNKQNDNK 504


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 107 PNCYVGSFPKNFSYGPFEQ 163
           PN Y    P+N  +GP  Q
Sbjct: 162 PNAYRFRPPQNPRFGPTHQ 180


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 107 PNCYVGSFPKNFSYGPFEQ 163
           PN Y    P+N  +GP  Q
Sbjct: 162 PNAYRFRPPQNPRFGPTHQ 180


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 107 PNCYVGSFPKNFSYGPFEQ 163
           PN Y    P+N  +GP  Q
Sbjct: 400 PNAYRFRPPQNPRFGPTHQ 418


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 95  YQDDPNCYVGSFPKNFSY 148
           Y DD N Y+   P N  +
Sbjct: 229 YNDDANVYILPDPYNTKF 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,958
Number of Sequences: 438
Number of extensions: 1299
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)