Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B02
         (432 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0)               30   0.93 
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_49201| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.8  
SB_11641| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-33)                 27   5.0  
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.6  
SB_8894| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.7  
SB_36507| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  

>SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 990

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -2

Query: 272 RVVVSLGWIIGMIEIDERRSSAYGF-IISARTV*WLREERIRVRNTTRGHYCRPME 108
           RVVVS+ + + ++ +D  R  AYG  I S R   + R  R      T+G+  R ++
Sbjct: 640 RVVVSMKYCLRVLTLDLCRERAYGLDIESYRKTSYYRRHRFSYHEMTKGNPSRSIQ 695


>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 213

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +3

Query: 129 TTCGIANPDPFFSQPSNGPGGNYEPISTGPAFVDFNHPNYPP 254
           TT G  +  P F+ P N P     P +  P    +N   YPP
Sbjct: 158 TTMGYPSAQPGFAPPGNYPPPPAPPPAYPPVTQGYNMSQYPP 199


>SB_49201| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 190

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -2

Query: 206 YGFIISARTV*WLREERIRVRNTTRGHYCRPMEHHYCPPRE-LCLRHPWP 60
           Y   +SA TV  L + R R R +  GH+   +  + C P + L L  P P
Sbjct: 34  YSSHVSASTVHLLEDRRTRKRESRVGHHTPILPSNSCSPGDPLVLERPPP 83


>SB_11641| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-33)
          Length = 390

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -1

Query: 321 FKIAYLY--ETFTSHHGREGCRI-AWVD 247
           F++A L   E + SH GREGC+   WVD
Sbjct: 75  FRLAQLLNEENWPSHLGREGCQFWIWVD 102


>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 848

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 140 TTRGHYCRPMEHHYCPPRELCLR 72
           T  GH C+P     CPP   C+R
Sbjct: 802 TGDGHQCQPDTCDSCPPNSHCMR 824


>SB_8894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 162

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 225 VDFNHPNYPPKRYD 266
           VD NHPNY P+ Y+
Sbjct: 32  VDLNHPNYLPETYN 45


>SB_36507| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 96

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 215 SSAYGFIISARTV*WLREERIRVRNTTRGHYCRPMEHHY 99
           S+ YGF+++   +   R   + VR  +RG  C+P+   Y
Sbjct: 3   SARYGFVVARYGLVVARYGLVGVRYRSRGGLCKPVRVRY 41


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,043,221
Number of Sequences: 59808
Number of extensions: 283690
Number of successful extensions: 916
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)