Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B02
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    27   5.8  
AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical ...    27   7.7  
AC006674-12|AAO38617.1|  357|Caenorhabditis elegans Hypothetical...    27   7.7  

>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 103 TIVHHVNSVCGTHGQYGEEEKHESFHLS 20
           TI  H++S+  THG Y  E   ES+ +S
Sbjct: 464 TIYSHLDSIVDTHGVYKVETIGESYMIS 491


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 103 TIVHHVNSVCGTHGQYGEEEKHESFHLS 20
           TI  H++S+  THG Y  E   ES+ +S
Sbjct: 464 TIYSHLDSIVDTHGVYKVETIGESYMIS 491


>Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical
           protein T06E4.8 protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +3

Query: 144 ANPDPFFSQPSNGPGGNYEPISTGPAFVDFNHPNYPP 254
           A P P F+ P+  P     PI  GPAF     P   P
Sbjct: 112 AAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-33 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 103 TIVHHVNSVCGTHGQYGEEEKHESFHLS 20
           TI  H++S+  THG Y  E   ES+ +S
Sbjct: 464 TIYSHLDSIVDTHGVYKVETIGESYMIS 491


>AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical
           protein F23H11.2 protein.
          Length = 865

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = -2

Query: 272 RVVVSLGWIIGMIEIDERRSSAYGFIISARTV*WLREERIRV 147
           +++++L  ++ ++      SS Y  I+++  V W+RE+R R+
Sbjct: 288 QLILNLEMLVAILH-SALMSSGYQTILTSDVVRWIREDRFRI 328


>AC006674-12|AAO38617.1|  357|Caenorhabditis elegans Hypothetical
           protein K12H6.6b protein.
          Length = 357

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 125 YCRPMEHHYCPPRELCLRHPWP 60
           +C P+++ Y  P  + L  PWP
Sbjct: 282 HCSPLQYPYSNPYSILLDAPWP 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,606,807
Number of Sequences: 27780
Number of extensions: 209716
Number of successful extensions: 571
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)