Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B02
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   4.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 48  SSPYWPWVPQTEFTWWTIVVFHRTAIV 128
           S+P W + P   FTW  I V    A+V
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFAVV 575


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 86  HVVDNSGVPSDGNSDHVWYCEPGSFLLSTIKRSWRKL 196
           H+V NS +PS   +   W C     L+  I+  W  L
Sbjct: 470 HLVWNSWMPSIRGAIQQWTCRQPEPLIELIEH-WMPL 505


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 225 VDFNHPNYPPKRY 263
           +D NHP +  K Y
Sbjct: 195 LDMNHPGFADKEY 207


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 167 STIKRSWRKL*THKHWT 217
           S+    WRKL    HWT
Sbjct: 447 SSKSSGWRKLRNIVHWT 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,942
Number of Sequences: 438
Number of extensions: 2851
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)