Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_B01
(301 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 26 1.4
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 26 1.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 2.4
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 25 3.1
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 25 3.1
SPAC3A12.04c |||RNase P and RNase MRP subunit p30 |Schizosacchar... 24 4.2
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 24 5.5
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy... 24 5.5
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 24 5.5
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 23 7.3
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 23 7.3
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 23 9.6
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 23 9.6
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 1.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 153 LQSM*SSVPDHLALYPGHE 97
L ++ SS+P++ +YPGHE
Sbjct: 161 LNAVLSSLPNNTVIYPGHE 179
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.8 bits (54), Expect = 1.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 53 ARKPVTRASTRGSRTSCPGYRAR 121
A++P S+RG SCPGY+AR
Sbjct: 68 AQEPTLYESSRG--LSCPGYQAR 88
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.0 bits (52), Expect = 2.4
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 123 DRELRTTLTEVDFKVVVLIFSQTRIHFLYSLK-VNIKVCDSR---SLKISPTNVK*N 281
D+ LRT + + F ++ L TR+ + LK V C +R ++ ++PT + N
Sbjct: 1230 DKMLRTLMADEKFSIIFLQLDLTRVSGVSILKIVRSSNCANRNTPAIALTPTRIDIN 1286
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 274 FTFVGEIFKLRESQTLILTFK 212
FT G IF + S LIL+FK
Sbjct: 527 FTGTGSIFTISSSSRLILSFK 547
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -1
Query: 265 VGEIFKLRESQTLILTFKLYKKWIRVCENIK 173
+GE+ + R+S + +LTFK K+ + C++ +
Sbjct: 1 MGEVERTRQSSSSLLTFK-RKRALEACDSCR 30
>SPAC3A12.04c |||RNase P and RNase MRP subunit p30
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 24.2 bits (50), Expect = 4.2
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 120 GDRELRTTLTEVDFKVVVLIFSQTRIHFLYSLKVNIKVCDSRSLKIS 260
GDR L+ T ++++F ++ + F+Q +L + + V ++IS
Sbjct: 97 GDRLLQQTCSDLEFDILSIDFTQRLPFYLKHTFMGLAVSRDIGIEIS 143
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 126 RELRTTLTEVDFKVVVLIFSQTRIHFLY 209
+E T++ + F + +FS+T+ H LY
Sbjct: 722 KEFLTSICKTVFDINYGLFSETKAHLLY 749
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 271 TFVGEIFKLRESQTLILTFKLYKKWIRVCENIKTTTLKSTSV 146
TF+ + FKL S TL Y I++ + +T+ L S+
Sbjct: 405 TFITKAFKLVSSNTLQAMSHFYATMIKLFPSNRTSILMYISL 446
>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 424
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +1
Query: 31 VVSFGKK--CAEAGYPGVYSRVTH 96
VVSFG C E G P +S+++H
Sbjct: 30 VVSFGSFYICNEEGCPAKFSKISH 53
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 194 DPLFVQFKSQY*SL*LS*FKNFSYEREIK 280
DPLF + K LS FK+F+YE ++K
Sbjct: 17 DPLFNELKR------LSCFKSFTYENDLK 39
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 173 FNIFTDADPLFV 208
FNI+T DPLF+
Sbjct: 257 FNIYTQTDPLFM 268
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 277 YFTFVGEIFKLRESQTLILTFKLYKKWIRV 188
Y TF G +S LI TFKL +WI++
Sbjct: 2527 YLTFHGINLFFTDSH-LIRTFKLDVRWIQI 2555
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 23.0 bits (47), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 105 GHEVRDPRVDARVTGF 58
GH + DP+V +R+ F
Sbjct: 40 GHSITDPQVASRINAF 55
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 189 TRIHFLYSLKVNIKVCDSRSLKISPTNVK 275
T + +L+S +V++KVC SPT K
Sbjct: 352 TFLRYLFSDEVSVKVCHVLKELRSPTGEK 380
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,099,224
Number of Sequences: 5004
Number of extensions: 17414
Number of successful extensions: 52
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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