Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_B01
         (301 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    37   0.002
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    37   0.003
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    35   0.012
Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical pr...    27   3.3  
U41528-5|AAM51514.2|  389|Caenorhabditis elegans Hypothetical pr...    27   3.3  
DQ139948-1|ABA29469.1|  381|Caenorhabditis elegans putative prot...    27   3.3  

>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 37.1 bits (82), Expect = 0.002
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
 Frame = +1

Query: 16  FYQIGVVSFGKK-----CAEAGYPGVYSRVTHFVPWIQSKVIG 129
           + QIG+ S+G         +  +PGVY+R++ +VPWIQ  VIG
Sbjct: 242 YVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQG-VIG 283


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 36.7 bits (81), Expect = 0.003
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 16  FYQIGVVSFGKKCAEAGYPGVYSRVTHFVPWIQSKVIG 129
           F   GV+S+G  CA+   PG+Y+ V  ++ WI + + G
Sbjct: 225 FVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIING 262


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 34.7 bits (76), Expect = 0.012
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 13  HFYQIGVVSFGKKCAEAGYPGVYSRVTHFVPWI 111
           H+   GVVS+G  CA  G PGVY  V     WI
Sbjct: 252 HWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284


>Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical
           protein F09B12.2 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 298 LYYV*KFYFTFVGEIFKLRESQTLILTFKLYKKWI 194
           L YV   ++  +GE + +R +   +L F LY  W+
Sbjct: 46  LLYVLPTWYPVMGEAWVIRATCFGVLVFNLYSNWV 80


>U41528-5|AAM51514.2|  389|Caenorhabditis elegans Hypothetical
           protein C15C7.7 protein.
          Length = 389

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 199 WIRVCENIKTTT 164
           W+RVCE+I TTT
Sbjct: 245 WVRVCEHIDTTT 256


>DQ139948-1|ABA29469.1|  381|Caenorhabditis elegans putative protein
           O-fucosyltransferase1 protein.
          Length = 381

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 199 WIRVCENIKTTT 164
           W+RVCE+I TTT
Sbjct: 237 WVRVCEHIDTTT 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,115,148
Number of Sequences: 27780
Number of extensions: 98623
Number of successful extensions: 186
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)