Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_A24
         (216 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   0.41 
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   1.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   5.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   5.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   6.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   6.7  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 0.41
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 57  SSPYWPWLPQTEFTWWTIVVFHRTAIV 137
           S+P W + P   FTW  I V    A+V
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFAVV 575


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 7   RQTTLTLFDNESFRVFLLRRIGHGCRKQSSR 99
           RQ    L  +ESFR    R     CRK+  +
Sbjct: 427 RQFLYCLAGDESFRKRRQREAAGNCRKRGEK 457


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 164 DPGSQ*QRGHYCRPMEHHY 108
           D G    RGH  +   HH+
Sbjct: 388 DSGENNSRGHSGQSSSHHH 406


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 5/18 (27%), Positives = 9/18 (50%)
 Frame = +3

Query: 57  SSPYWPWLPQTEFTWWTI 110
           S P + W  + E  W+ +
Sbjct: 258 SHPTYDWFEKLELKWFAV 275


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 92  VHVVDNSGVPSDGNSDHVVIANPDPFFSQPSN 187
           V ++ N GVPS  N     I N  P      N
Sbjct: 79  VTILRNDGVPSSLNVISNKIGNGGPLLEPYPN 110


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/12 (41%), Positives = 6/12 (50%)
 Frame = +3

Query: 51  FSSSPYWPWLPQ 86
           +   PYW W  Q
Sbjct: 834 YGERPYWNWSNQ 845


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,622
Number of Sequences: 438
Number of extensions: 993
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)