Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_A23
         (322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   4.8  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   4.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    20   6.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    20   6.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   6.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   6.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   6.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   6.4  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 35  GSPGLQESDEGEV 73
           GSP + ESDE +V
Sbjct: 198 GSPSVSESDEVDV 210


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 110 NKF*KKIVFLVMKLRPRPIPAARGIH 33
           N + KK+ + ++ +   P+P    IH
Sbjct: 326 NNYNKKLYYNIINIEQIPVPVPVPIH 351


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -3

Query: 119 YSLNKF*KKIVFLVMKLRPRPIP 51
           Y+ N + KK+ + ++ +   P+P
Sbjct: 103 YNNNNYNKKLYYNIINIEQIPVP 125


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -3

Query: 119 YSLNKF*KKIVFLVMKLRPRPIP 51
           Y+ N + KK+ + ++ +   P+P
Sbjct: 103 YNNNNYNKKLYYNIINIEQIPVP 125


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 240 YLPSNPXDLYRSLD 199
           +LP +P DL R  D
Sbjct: 355 FLPKHPLDLLREAD 368


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 70  FALVRFLQPGGSI 32
           +A   FL PGGS+
Sbjct: 65  YAKCEFLNPGGSV 77


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -3

Query: 314 WNCVNLFLQYPMLYFYGLLSTE 249
           +NCV + +Q+ +LY + ++  +
Sbjct: 694 YNCVPINVQFSVLYGFVIIECQ 715


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 240 YLPSNPXDLYRSLD 199
           +LP +P DL R  D
Sbjct: 355 FLPKHPLDLLREAD 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,173
Number of Sequences: 438
Number of extensions: 1496
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)