Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_A15
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 37 0.008
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 36 0.024
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 35 0.043
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 34 0.075
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 33 0.13
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 30 0.92
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 30 0.92
AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical... 30 1.2
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 29 1.6
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 29 1.6
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear horm... 28 4.9
Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 51.6 bits (118), Expect = 3e-07
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 233 CNSDVDYVPDKKECNKYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPANSNRPEC 394
C+ ++ D C ++RCV G + +C GT+FN L+VCDWP S P C
Sbjct: 1245 CSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWP--SAVPSC 1296
Score = 35.5 bits (78), Expect = 0.024
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 272 CNK-YWRCVNGEGMQFSCQPGTIFNIKLNVCDWPANSNRP 388
CN ++ C N Q C PGT+FNI CD+ ++ P
Sbjct: 205 CNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTDDP 244
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 DKKECNKYWRCVNGEGMQF-SCQPGTIFNIKLNVCDWP 370
++++C+ +C GE + SCQ FN CD+P
Sbjct: 1192 NERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYP 1229
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 227 DICNSDVDYVPDKKEC-NKYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPAN 376
+ C SD + K EC N ++ C G + +C +FN ++ CDWP N
Sbjct: 177 EYCESDGNI--SKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKN 225
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 290 CVNGEGMQFSCQPGTIFNIKLNVCDWPANS 379
C NG F C P +FN +CD+P S
Sbjct: 329 CQNGRENIFECPPSLVFNENSLICDYPETS 358
Score = 30.3 bits (65), Expect = 0.92
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 278 KYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPAN 376
++ CV+GE C +++ L CDW N
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHN 73
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.024
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 251 YVPDKKECNKYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPANSNRP 388
Y PD C +++C +G Q SC GTI++ CD RP
Sbjct: 165 YKPDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTCDHNRGQCRP 210
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 34.7 bits (76), Expect = 0.043
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 269 ECNKYWRCVNGEGMQFSCQPGTIFNIKLNVCDWP 370
+C K+ RCVNG F C G F+ +CD P
Sbjct: 577 DCLKFIRCVNGISYNFECPNGLSFHADTMMCDRP 610
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.9 bits (74), Expect = 0.075
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 260 DKKECNKY-WRCVNGEGMQFSCQPGTIFNIKLNVCDWP 370
D +C+ Y W+C NG+ + +C I+ + N+CD+P
Sbjct: 213 DNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFP 250
Score = 33.5 bits (73), Expect = 0.099
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 248 DYVPDKKECNK-YWRCVNGEGMQFSCQPGTIFNIKLNVCDWPANSN 382
DY DK CN+ Y++C NG C ++ L CD+ N N
Sbjct: 119 DYALDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDYHTNCN 164
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 KECN-KYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPA 373
KEC+ + C NG G C +F+ +++ C++ A
Sbjct: 363 KECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAA 399
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 233 CNSDVDYVPDKKECNK-YWRCVNGEGMQFSCQPGTIFNIKLNVC 361
C+ D + C++ Y +C+ G + SC PG +N K +C
Sbjct: 889 CSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMC 932
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 281 YWRCVNGEGMQFSCQPGTIFNIKLNVCDWPANSNRPECQ 397
++ C NG+ + +C IFN + CD+ ++N +CQ
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDY--STNVRDCQ 627
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 33.1 bits (72), Expect = 0.13
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 299 GEGMQFSCQPGTIFNIKLNVCDWPANS 379
G + C PGT+F+++ VC W NS
Sbjct: 303 GRWQRMPCAPGTVFDVQSQVCVWDTNS 329
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 CNSDVDYVPDKKECN-KYWRCVNGEGMQFSCQPGTIFNIKLNVCDWP 370
C D + C+ + C G C +FN + VCDWP
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 233 CNSDVDYVPDKKECN-KYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPAN 376
C + +D + EC ++ C G C I+N L +CDW N
Sbjct: 24 CTNALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHN 72
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 290 CVNGEGMQFSCQPGTIFNIKLNVCDWPANS 379
C NG F C +FN + +CD+P S
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYPQTS 451
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 233 CNSDVDYVPDKKECN-KYWRCVNGEGMQFSCQPGTIFNIKLNVCDWP 370
C D + C+ + C G C +FN + VCDWP
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 233 CNSDVDYVPDKKECN-KYWRCVNGEGMQFSCQPGTIFNIKLNVCDWPAN 376
C + +D + EC ++ C G C I+N L +CDW N
Sbjct: 24 CTNALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHN 72
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 290 CVNGEGMQFSCQPGTIFNIKLNVCDWPANS 379
C NG F C +FN + +CD+P S
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYPQTS 451
>AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical
protein Y39A3CL.1 protein.
Length = 598
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 392 IQDGLSWRANRKRSV*C*ILFRVDTRTACLRR*RIANTYYIPSYQAHNLRQ 240
++D L+W N +++ I +D C R N Y+ P Y +H LRQ
Sbjct: 522 LEDSLNWARNPSKTIKLEIDEHLDRCDTCTNRDLNPNCYF-PEYLSHALRQ 571
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 288 DASTAKACSSRVNPEQYSTSN*TFAIGPPTQTVL 389
+ASTA CS+ + ++Y++S +FA PP V+
Sbjct: 51 NASTASTCSTTSSSKRYTSSQQSFAFVPPVFPVV 84
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 334 CSGLTRELHAFAVDASPILITF 269
CS + RE HA +DASP ITF
Sbjct: 113 CSSVYREPHATIIDASPSSITF 134
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 442 LRFSNKDFKIRFHLTLAFRTV*VGGPIANVQFDV-EYC 332
LRFSN D+K +F + +A V P A++ + EYC
Sbjct: 40 LRFSNLDYKCQFPILIAKSDVIKLDPTAHLTMKIGEYC 77
>AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 132 protein.
Length = 276
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 263 KKECNKYWRCVNGEGMQFSCQP 328
+K C K +C NGEG Q+ C+P
Sbjct: 43 QKNCQKPSKCKNGEG-QYHCKP 63
>Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical protein
T22C1.10b protein.
Length = 1291
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RRHAVLVSTRNNIQHQTERLRLARQLKPS*MPTLNEIEF 417
+RHA LV Q E RLAR L+ T+NEI F
Sbjct: 1124 KRHAFLVKVAE--QGSMEERRLARHLEMEWKLTVNEISF 1160
>Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical protein
T22C1.10a protein.
Length = 1307
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RRHAVLVSTRNNIQHQTERLRLARQLKPS*MPTLNEIEF 417
+RHA LV Q E RLAR L+ T+NEI F
Sbjct: 1140 KRHAFLVKVAE--QGSMEERRLARHLEMEWKLTVNEISF 1176
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 299 GEGMQFSCQPGTIFNIKLNVC 361
GE + C T+FN LNVC
Sbjct: 209 GEWTRMQCSQSTVFNSDLNVC 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,046,812
Number of Sequences: 27780
Number of extensions: 168133
Number of successful extensions: 442
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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